Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00012 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTGCAGTCACCGCAAGCTCATCCTCGTCAACATAGGAAGAAATTGGAGGTGTTCAATGAGGTGCTCCGTCGAATCCAAGAGTCAAATTGTGAGGATGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGATGTGAATGTCGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTGAAGCTGGCAGAGGACCCTGGTAATCGACCTGTATTTCAAGTTCGCTCAGTACAGGTGTATCCTTATGGATGTGCTAATTTTGCCGACTCAATGCATTCTGATCCTTCTGAGAAAGAAGACGCCCAGAGTTCATTTAACTATTCTTTTAAGCAGGGAGTTCACCCACCGCCTACTTTTGGTTCATCTTCTAATCTCGAAGCTCTCTCCCGCCAAGCATGTAAAAATAATGCTGAAGATGGGGATGGAGATATGGATTTGGCACCATGCTTTTACAGGCCCATGCACGAGATTACTTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTACTTGGGGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACAGATGGGTTTTCTCTTGATGTCTTTGTCGTCGTAGGGTGGCCAAATGAGGAAACTGAAGAGCTTAAACGTGTACTGGAAAAGGAAATTTTGAAGTACAAGCAGAAGCAATATCTGTCAAAACAGGGCATGCCTTCTGCTGTTAATGAACATTACTATCAGGCAAGGATGGAACCCTTCCCTCAGTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGGACTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTCCAATTCATTGGAGCATGCACTCAGCCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAGCAAAGGGGTGTATTTAAGCTTCCTTCTTTACTAAAAGTAGCAATCGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGCTGTTTGATGATGCTTCAGATCTCTTTTCAATGATTTGA 1428 0.4314 MAIEEDLESCGSRACVQSPQAHPRQHRKKLEVFNEVLRRIQESNCEDANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPGNRPVFQVRSVQVYPYGCANFADSMHSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALSRQACKNNAEDGDGDMDLAPCFYRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTTDGFSLDVFVVVGWPNEETEELKRVLEKEILKYKQKQYLSKQGMPSAVNEHYYQARMEPFPQCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPELFDDASDLFSMI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00012 475 Pfam Protein tyrosine and serine/threonine kinase 298 468 IPR001245 GO:0004672|GO:0006468
Pral5331g00012 475 CDD ACT_TyrKc 181 248 - -
Pral5331g00012 475 Gene3D Phosphorylase Kinase; domain 1 287 376 - -
Pral5331g00012 475 ProSiteProfiles Protein kinase domain profile. 298 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00012 475 FunFam Serine/threonine-protein kinase isoform 1 288 376 - -
Pral5331g00012 475 ProSitePatterns Protein kinases ATP-binding region signature. 304 325 IPR017441 GO:0005524
Pral5331g00012 475 SMART serkin_6 298 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00012 475 ProSiteProfiles ACT domain profile. 183 263 IPR002912 -
Pral5331g00012 475 CDD STKc_MAP3K-like 304 473 - -
Pral5331g00012 475 Coils Coil 233 253 - -
Pral5331g00012 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Pral5331g00012 475 Gene3D Transferase(Phosphotransferase) domain 1 377 474 - -
Pral5331g00012 475 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 473 - -
Pral5331g00012 475 SUPERFAMILY Protein kinase-like (PK-like) 273 473 IPR011009 -
Pral5331g00012 475 Pfam ACT domain 183 228 IPR002912 -
Pral5331g00012 475 SUPERFAMILY ACT-like 181 246 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00012 Pral-Chr5331 76832 86505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00012 1 473 MAP Kinase Kinase Kinase AT4G35780 70.000 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5331g00012 PK_Tyr_Ser-Thr 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00012 - - gmx:100816767 789.26