Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00011 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTGCAGTCACCGCAAGCTCATCCTCGTCAACATAGGAAGAAATTGGAGGTGTTCAATGAGGTGCTCCGTCGAATCCAAGAGTCAAATTGTGAGGATGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGATGTGAATGTCGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTGAAGCTGGCAGAGGACCCTGGTAATCGACCTGTATTTCAAGTTCGCTCAGTACAGGTGTATCCTTATGGATGTGCTAATTTTGCCGACTCAATGCATTCTGATCCTTCTGAGAAAGAAGACGCCCAGAGTTCATTTAACTATTCTTTTAAGCAGGGAGTTCACCCACCGCCTACTTTTGGTTCATCTTCTAATCTCGAAGCTCTCTCCCGCCAAGCATGTAAAAATAATGCTGAAGATGGGGATGGAGATATGGATTTGGCACCATGCTTTTACAGGCCCATGCACGAGATTACTTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTACTTGGGGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACAGATGGGTTTTCTCTTGATGTCTTTGTCGTCGTAGGGTGGCCAAATGAGGAAACTGAAGAGCTTAAACGTGTACTGGAAAAGGAAATTTTGAAGTACAAGCAGAAGCAATATCTGTCAAAACAGGGCATGCCTTCTGCTGTTAATGAACATTACTATCAGGCAAGGATGGAACCCTTCCCTCAGTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGGACTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTCCAATTCATTGGAGCATGCACTCAGCCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAGCAAAGGGGTGTATTTAAGCTTCCTTCTTTACTAAAAGTAGCAATCGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGATCTCTTTTCAATGA 1404 0.4323 MAIEEDLESCGSRACVQSPQAHPRQHRKKLEVFNEVLRRIQESNCEDANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPGNRPVFQVRSVQVYPYGCANFADSMHSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALSRQACKNNAEDGDGDMDLAPCFYRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTTDGFSLDVFVVVGWPNEETEELKRVLEKEILKYKQKQYLSKQGMPSAVNEHYYQARMEPFPQCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEISFQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00011 467 CDD ACT_TyrKc 181 248 - -
Pral5331g00011 467 ProSitePatterns Protein kinases ATP-binding region signature. 304 325 IPR017441 GO:0005524
Pral5331g00011 467 FunFam Serine/threonine-protein kinase isoform 1 288 376 - -
Pral5331g00011 467 Gene3D Transferase(Phosphotransferase) domain 1 377 467 - -
Pral5331g00011 467 ProSiteProfiles ACT domain profile. 183 263 IPR002912 -
Pral5331g00011 467 SUPERFAMILY ACT-like 181 246 IPR045865 -
Pral5331g00011 467 Coils Coil 233 253 - -
Pral5331g00011 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Pral5331g00011 467 Pfam Protein tyrosine and serine/threonine kinase 298 464 IPR001245 GO:0004672|GO:0006468
Pral5331g00011 467 SMART serkin_6 298 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00011 467 Pfam ACT domain 183 228 IPR002912 -
Pral5331g00011 467 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 464 - -
Pral5331g00011 467 CDD STKc_MAP3K-like 304 464 - -
Pral5331g00011 467 Gene3D Phosphorylase Kinase; domain 1 287 376 - -
Pral5331g00011 467 SUPERFAMILY Protein kinase-like (PK-like) 273 464 IPR011009 -
Pral5331g00011 467 ProSiteProfiles Protein kinase domain profile. 298 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00011 Pral-Chr5331 76832 86505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00011 1 464 MAP Kinase Kinase Kinase AT4G35780 71.245 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5331g00011 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00011 - - gmx:100816767 786.178