Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00009 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTGCAGTCACCGCAAGCTCATCCTCGTCAACATAGGAAGAAATTGGAGGTGTTCAATGAGGTGCTCCGTCGAATCCAAGAGTCAAATTGTGAGGATGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGATGTGAATGTCGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTGAAGCTGGCAGAGGACCCTGGTAATCGACCTGTATTTCAAGTTCGCTCAGTACAGGTGTATCCTTATGGATGTGCTAATTTTGCCGACTCAATGCATTCTGATCCTTCTGAGAAAGAAGACGCCCAGAGTTCATTTAACTATTCTTTTAAGCAGGGAGTTCACCCACCGCCTACTTTTGGTTCATCTTCTAATCTCGAAGCTCTCTCCCGCCAAGCATGTAAAAATAATGCTGAAGATGGGGATGGAGATATGGATTTGGCACCATGCTTTTACAGGCCCATGCACGAGATTACTTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTACTTGGGGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACAGATGGGTTTTCTCTTGATGTCTTTGTCGTCGTAGGGTGGCCAAATGAGGAAACTGAAGAGCTTAAACGTGTACTGGAAAAGGAAATTTTGAAGTACAAGAAGCAATATCTGTCAAAACAGGGCATGCCTTCTGCTGTTAATGAACATTACTATCAGGCAAGGATGGAACCCTTCCCTCAGTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGGACTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTCCAATTCATTGGAGCATGCACTCAGCCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAGCAAAGGGGTGTATTTAAGCTTCCTTCTTTACTAAAAGTAGCAATCGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGTCCCCATTACAAGCGGCAGTAGGGGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCAGGGCTTTCTGAACTGCTCCAGCGATGTTGGCAACAAGATCCAATTGAGAGACCGAATTTCTCAGAAATATTGGAAATTCTTCAGCAGATAGCAAAGGAGGTTACTGACGATCGACCCAAAGATAAATTATCTCATGGCTTTCTCTCGGCACTAAGACGGGCCTATCAGTAA 1728 0.4387 MAIEEDLESCGSRACVQSPQAHPRQHRKKLEVFNEVLRRIQESNCEDANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPGNRPVFQVRSVQVYPYGCANFADSMHSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALSRQACKNNAEDGDGDMDLAPCFYRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTTDGFSLDVFVVVGWPNEETEELKRVLEKEILKYKKQYLSKQGMPSAVNEHYYQARMEPFPQCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLSPLQAAVGVVQKGLRPSIPKNAHPGLSELLQRCWQQDPIERPNFSEILEILQQIAKEVTDDRPKDKLSHGFLSALRRAYQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00009 575 CDD ACT_TyrKc 181 248 - -
Pral5331g00009 575 FunFam serine/threonine-protein kinase HT1 376 567 - -
Pral5331g00009 575 ProSiteProfiles ACT domain profile. 183 262 IPR002912 -
Pral5331g00009 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 150 555 - -
Pral5331g00009 575 Gene3D Phosphorylase Kinase; domain 1 286 375 - -
Pral5331g00009 575 Gene3D Transferase(Phosphotransferase) domain 1 376 565 - -
Pral5331g00009 575 Coils Coil 233 253 - -
Pral5331g00009 575 SUPERFAMILY ACT-like 181 246 IPR045865 -
Pral5331g00009 575 CDD STKc_MAP3K-like 303 546 - -
Pral5331g00009 575 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Pral5331g00009 575 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Pral5331g00009 575 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Pral5331g00009 575 SUPERFAMILY Protein kinase-like (PK-like) 272 546 IPR011009 -
Pral5331g00009 575 ProSiteProfiles Protein kinase domain profile. 297 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00009 575 SMART serkin_6 297 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00009 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Pral5331g00009 575 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Pral5331g00009 575 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Pral5331g00009 575 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Pral5331g00009 575 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Pral5331g00009 575 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00009 Pral-Chr5331 75980 86505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00009 1 575 MAP Kinase Kinase Kinase AT4G35780 70.761 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5331g00009 PK_Tyr_Ser-Thr 1.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00009 - - gmx:100816767 985.326