Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5330g00013 ATGAAGCATTTACCGAAGCATCCCAATATCGTGACCTTAAAGGGCACCTATGAAGACGACAATGCCGTTCATCTGGTGATGGAATTGTGCGAAGGAGGAGAATTGTTCGATCGGATTGTTGCGCGTGGGCACTACACAGAACGCGCCGCCGCAGTGGTCACCCGGACGATTGTCGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCATCGAGATCTCAAGCCTGAGAACTTTTTGTTCGGAAACAAGAAAGAAACAGCACCACTGAAGGCTATTGATTTTGGGCTGTCGGTTTTCTTTAAACCTGGTGAAAGATTTAATGAGATAGTTGGAAGTCCTTATTACATGGCTCCTGAGGTACTAAAACGAAATTATGGCCCAGAAGTAGATATATGGAGTGCTGGAGTAATTCTATACATCCTACTTTGTGGTGTCCCGCCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAAGCAATCATAAGATCTGTTATTGATTTTAAAAGGGACCCATGGCCTAAAGTTTCTGATAATGCGAAAGACCTTGTTAAGAAAATGCTTGATCCTGACCCAAGGCGGCGGCTTTCTGCGCAGGAAGTGTTAGATCATCCATGGTTACTGAATGCCAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAAGGCAAGGCTCAAGCAATTCTCAGTAATGAACAAGCTTAAGAAAAGAGCTCTAAGGGTGATTGCAGAGCATTTGTCTGTAGAAGAAGTTGCAGGTATAAAAGAGGGATTCAAGGTGATGGATACTAGCAATAGAGGAAAAATTAACATTGATGAGCTACGACTGGGGTTGCATAAATTAGGCCATCAGATGGCTGATGCTGACGTTCAAATTCTGATGGAAGCAGGCGATACAGATAAAGACGGATACCTAGATTATGGAGAATTTGTAGCCATTTCTGTTCATCTGAGAAAGATGGGCAATGATGAGCACCTGAAGAAAGCCTTCCAATTCTTCGATCAGAACCAGAGTGGATATATAGAGATTGAGGAGCTACGCCACGCCTTAGCTGATGAAGTTGACACAAACAACGAAGAAGTCATTAGTGCGATTATGCATGATGTGGACACAGACAAGGATGGACGAATAAGTTATGAGGAATTCGCTGCAATGATGAAGGCTGGCACAGATTGGAGGAAGGCATCAAGACAGTATTCACGAGAGAGGTTCAAAAGTCTAAGTCTCGAATTGATGAGGGACGGATCCTTGACATTGGACAACAACAAGCAATGA 1278 0.4366 MKHLPKHPNIVTLKGTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPRRRLSAQEVLDHPWLLNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFKVMDTSNRGKINIDELRLGLHKLGHQMADADVQILMEAGDTDKDGYLDYGEFVAISVHLRKMGNDEHLKKAFQFFDQNQSGYIEIEELRHALADEVDTNNEEVISAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFKSLSLELMRDGSLTLDNNKQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5330g00013 425 CDD STKc_CAMK 1 206 - -
Pral5330g00013 425 Pfam EF-hand domain pair 255 314 IPR002048 GO:0005509
Pral5330g00013 425 Pfam EF-hand domain pair 325 388 IPR002048 GO:0005509
Pral5330g00013 425 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 383 - -
Pral5330g00013 425 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5330g00013 425 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Pral5330g00013 425 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Pral5330g00013 425 Pfam Protein kinase domain 3 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5330g00013 425 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Pral5330g00013 425 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Pral5330g00013 425 SUPERFAMILY Protein kinase-like (PK-like) 1 214 IPR011009 -
Pral5330g00013 425 CDD EFh 326 388 IPR002048 GO:0005509
Pral5330g00013 425 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Pral5330g00013 425 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5330g00013 425 FunFam Calcium-dependent protein kinase 7 216 391 - -
Pral5330g00013 425 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Pral5330g00013 425 Gene3D - 216 391 - -
Pral5330g00013 425 SMART efh_1 290 318 IPR002048 GO:0005509
Pral5330g00013 425 SMART efh_1 362 390 IPR002048 GO:0005509
Pral5330g00013 425 SMART efh_1 254 282 IPR002048 GO:0005509
Pral5330g00013 425 SMART efh_1 326 354 IPR002048 GO:0005509
Pral5330g00013 425 FunFam calcium-dependent protein kinase 13 35 215 - -
Pral5330g00013 425 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Pral5330g00013 425 SUPERFAMILY EF-hand 231 400 IPR011992 -
Pral5330g00013 425 Gene3D Transferase(Phosphotransferase) domain 1 35 215 - -
Pral5330g00013 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Pral5330g00013 425 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5330g00013 Pral-Chr5330 45339 60291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5330g00013 1 421 EF-hand Containing Proteins AT5G19450 83.412 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5330g00013 Pkinase 5.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5330g00013 K13412 - tcc:18598981 785.408