Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5330g00001 ATCTTCGCTGGCCTCTTGCTACGTTCAGCATTCACTTCTGAAATTCCATTGGGTTCAAAACTTTCTGTGGTTGACAATGACAGCTGGGCCTCCTCCAATGGTGATTTTGCATTAGGATTCTTTAACACTTCAGATCAACCTAGTCAGTTCAGGATTGGCATACGTTTCAATTCAAAGTCTATGCCATTTAGCCAACAAACTGTGGTCTGGGTTGCTGGAGCTCATGTCACTGTGGGTAGCATGTCGTATTTCCAACTCACCCCCGAAGGGGAATTAGTCCTCTTTGATTCATTACAGGGAGTAGTATGGACCAGTGGAACTGCCAACCAATCTGTAGTTTCAGCAGCCTTCCGTGACAATGGCAATCTTGAGCTCATAGACAGAGAGCAACGTGTTGTTTGGCAGAGTTTTGATACTCCATCTGATACACTAGTCCCAGGGCAGAGTTTATCTGTGCATCAAACACTTCGAGCTGCCAGCAAGCAAACCACATCTAGTTACTACAGTCTTTACTTGAATGGCTCGGGACAGTTACATCTTCGATGGGAAAGTAATATTACCTATTGGACAAGTGATGATAGCCCTTCTATCGCAAATCTGAGTGCTTGTCTCACAACCTCTGGAGCCCTGCAACTTCAAGACCAAAGTTCAAAACCTGTTTGGTCAGTATTTGGTGAAGACCACAATGAATCAGTGAATTACAGGTTTCTTAGGCTTGATTTGGATGGCAATCTGCGCATATATTCATGGATAGACACGTTACAATCATGGAAATCAGTATGGCAGGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTCAACGTGGTATGTGTTTTTTAAGTGCTTCAGGTTCTGCTGATTGCCGATGCCCGTTTGAGTTAGCTGACCCTAACAAATGTTTGGTTCCATACGATGAGGCATGTGAATCTGGCATCAATATGCTTACATATGAGAAAACATTTCTATATGGAATTTACCCACCTGAAGATTCAATCACCATAAGTAGTTTGCAGCATTGCAAGCAGTTGTGTTTGAATGATCCACAATGTACAGTTGCAACCTTTTTGAATGATGGGAGTGCTCAATGCTCAATAAAGAAAACTAAGTATGTCACTGGTTTTGCAGATCCATCTCTAACCTCGGTATCTTTTGTTAAGAGATGTTCAGGTCCATTAGCTGTGAATCCTGGTCTTGTTAATTCACCTCCTCCCAAACAGCCTCCAGCACTTTGTGTTCCTTGTTTGATTGGAGCAGCCTCTGCCACTTTTTTCGTCTTTGCCATCATACAGTTGGGAATTGGTTTCTGGATCTGCAGAAGAAGAAACATCACTAGGAAAGAAGTTACTTTAGCTTTAACATGCCCCGTTTCGAAGGGTTTGTTTGTGTTGTCCTCAGAGATAAGGAGCCTCACTGGGGATTTCAAGAACCAAATCGGTCCAAATATGTTCAAGGGTACACTGCAAGACAATCACTTGGTTGCAGTTAAGAATCTGAATGCCAGCATAGAAGAAAGGAGGTTCAGGAGCGCAGTTACAAAAATAGGAAGCATCCATCACAAGAACCTAGTGAAGCTGGAGGGCTACTGTTGTGAGTTCAATCACAGATTCTTGGTGTACGAGTATGTCAAGAATGGTTCTTTGGATAAGTTCTTTGGTGATTCAGCTCTTTGCAGGAGGCTAACTTGGAAAAAGAGACTTCAAATATGCTCAAGTGTAGCCAAATCCATTTGCTATTTGCACACCGAGTGTCGGGAGTTTCTTAGCCATGGCAATCTGAAGTGTGCAAATGTCTTACTGGATGAAATGGAGGCCAAGGTAACTGAATTTGGGTTTGCAAGAGCAGATGGTGAGGCATCATATTGTGGTTCTTCAGCTGAGAAAGATGTGGAGGATTTTGGCAAGCTGGCATTAACTCTGTTATCTGGGCGTCAAGACACTGGGGATCTTTGCCGGTGGGCACATGAACAATGGATAGAAGGACGATCCATCAATGTGGTTGATAAAAGAATTGATGGTGAAATCGATTCAGAGGAGCTAGAACGTGCGTTGAGAATAATATTCTGGTGTCTTCAAATGGACGAACGGAGGAGGCCTTCAATGGGGGAGGTGGCAAGAGTGCTAGATGGTATATTGAATGTTGATCTTCCACCACCTCCTTTTGCTGTCCAGAGGCCATTGCTAGAAGATGATGATACTTAA 2205 0.4331 IFAGLLLRSAFTSEIPLGSKLSVVDNDSWASSNGDFALGFFNTSDQPSQFRIGIRFNSKSMPFSQQTVVWVAGAHVTVGSMSYFQLTPEGELVLFDSLQGVVWTSGTANQSVVSAAFRDNGNLELIDREQRVVWQSFDTPSDTLVPGQSLSVHQTLRAASKQTTSSYYSLYLNGSGQLHLRWESNITYWTSDDSPSIANLSACLTTSGALQLQDQSSKPVWSVFGEDHNESVNYRFLRLDLDGNLRIYSWIDTLQSWKSVWQAVENQCKVFATCGQRGMCFLSASGSADCRCPFELADPNKCLVPYDEACESGINMLTYEKTFLYGIYPPEDSITISSLQHCKQLCLNDPQCTVATFLNDGSAQCSIKKTKYVTGFADPSLTSVSFVKRCSGPLAVNPGLVNSPPPKQPPALCVPCLIGAASATFFVFAIIQLGIGFWICRRRNITRKEVTLALTCPVSKGLFVLSFXEIRSLTGDFKNQIGPNMFKGTLQDNHLVAVKNLNASIEERRFRSAVTKIGSIHHKNLVKLEGYCCEFNHRFLVYEYVKNGSLDKFFGDSALCRRLTWKKRLQICSSVAKSICYLHTECREFLSHGNLKCANVLLDETXEAKVTEFGFARADGEASYCGSSAEKDVEDFGKLALTLLSGRQDTGDLCRWAHEQWIEGRSINVVDKRIDGEIDSEELERALRIIFWCLQMDERRRPSMGEVARVLDGILNVDLPPPPFAVQRPLLEDDDT 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5330g00001 736 ProSiteProfiles Protein kinase domain profile. 452 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5330g00001 736 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 140 259 - -
Pral5330g00001 736 Gene3D Transferase(Phosphotransferase) domain 1 545 626 - -
Pral5330g00001 736 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 11 139 - -
Pral5330g00001 736 Gene3D Hepatocyte Growth Factor 324 391 - -
Pral5330g00001 736 SUPERFAMILY Protein kinase-like (PK-like) 475 711 IPR011009 -
Pral5330g00001 736 Gene3D - 140 256 IPR036426 -
Pral5330g00001 736 Pfam Protein tyrosine and serine/threonine kinase 491 628 IPR001245 GO:0004672|GO:0006468
Pral5330g00001 736 SMART ntp_6 311 389 IPR003609 -
Pral5330g00001 736 PANTHER OS07G0415500 PROTEIN 9 724 - -
Pral5330g00001 736 PIRSF SRK 627 735 IPR024171 GO:0004674
Pral5330g00001 736 PIRSF SRK 1 625 IPR024171 GO:0004674
Pral5330g00001 736 SUPERFAMILY alpha-D-mannose-specific plant lectins 160 259 IPR036426 -
Pral5330g00001 736 Gene3D - 9 139 IPR036426 -
Pral5330g00001 736 Pfam D-mannose binding lectin 67 157 IPR001480 -
Pral5330g00001 736 Pfam PAN domain 326 374 IPR003609 -
Pral5330g00001 736 ProSiteProfiles Bulb-type lectin domain profile. 141 260 IPR001480 -
Pral5330g00001 736 Pfam S-locus glycoprotein domain 229 292 IPR000858 GO:0048544
Pral5330g00001 736 Gene3D Phosphorylase Kinase; domain 1 440 544 - -
Pral5330g00001 736 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 545 623 - -
Pral5330g00001 736 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 191 IPR036426 -
Pral5330g00001 736 CDD B_lectin 31 140 IPR001480 -
Pral5330g00001 736 ProSiteProfiles PAN/Apple domain profile. 310 390 IPR003609 -
Pral5330g00001 736 ProSiteProfiles Bulb-type lectin domain profile. 14 138 IPR001480 -
Pral5330g00001 736 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 441 544 - -
Pral5330g00001 736 Gene3D Transferase(Phosphotransferase) domain 1 627 718 - -
Pral5330g00001 736 SMART blect_4 20 140 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5330g00001 Pral-Chr5330 7692 10084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5330g00001 398 718 Receptor kinase-like Gene Family AT1G56120 31.667 1.42e-39 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5330g00001 PK_Tyr_Ser-Thr 3.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5330g00001 - - gmx:100809478 1100.12