Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5327g00007 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCCGTTTTATCTGATGCGAATAAGCGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGATTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAAGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTTGTTCTGCATCATCTACGTACGTAACTTACTCTGAAACTTCCACTTCTAACAAACGCAATTCCTCGGAGATGAATGTTGGGAAGAATGCGGATTCTCTTGACTTTGAAGCCACCTTCCAGGACTTCTGTCTAGGGACAGGTGGATCGGCTACAAGACATAAAGAAGGGAGGAGGAGAAGGAGGAGTACGAGGAACAGGTAG 627 0.445 MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGDFLNEMAAMMSQTKPNENGEESFEELQQLFEDMFQSDIGCSGSDSHTAASCSASSTYVTYSETSTSNKRNSSEMNVGKNADSLDFEATFQDFCLGTGGSATRHKEGRRRRRSTRNR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5327g00007 208 CDD DnaJ 10 70 IPR001623 -
Pral5327g00007 208 Gene3D DnaJ domain 7 137 IPR036869 -
Pral5327g00007 208 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Pral5327g00007 208 SMART dnaj_3 9 73 IPR001623 -
Pral5327g00007 208 Pfam DnaJ domain 10 78 IPR001623 -
Pral5327g00007 208 MobiDBLite consensus disorder prediction 185 208 - -
Pral5327g00007 208 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pral5327g00007 208 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pral5327g00007 208 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral5327g00007 208 PANTHER PUTATIVE, EXPRESSED-RELATED 2 180 - -
Pral5327g00007 208 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5327g00007 Pral-Chr5327 37725 42059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5327g00007 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 2.23e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5327g00007 - - lja:Lj3g3v2576120.1 277.715