Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5327g00006 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCCGTTTTATCTGATGCGAATAAGCGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGATTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAAGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTTGTTCTGCATCATCTACGTGGATCGGCTACAAGACATAA 465 0.4344 MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGDFLNEMAAMMSQTKPNENGEESFEELQQLFEDMFQSDIGCSGSDSHTAASCSASSTWIGYKT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5327g00006 154 CDD DnaJ 10 70 IPR001623 -
Pral5327g00006 154 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Pral5327g00006 154 SMART dnaj_3 9 73 IPR001623 -
Pral5327g00006 154 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pral5327g00006 154 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral5327g00006 154 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pral5327g00006 154 Pfam DnaJ domain 10 78 IPR001623 -
Pral5327g00006 154 PANTHER PUTATIVE, EXPRESSED-RELATED 2 146 - -
Pral5327g00006 154 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pral5327g00006 154 Gene3D DnaJ domain 7 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5327g00006 Pral-Chr5327 37724 42059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5327g00006 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.31e-10 56.6