Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5327g00005 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCCGTTTTATCTGATGCGAATAAGCGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGATTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAAGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTTGTTCTGCATCATCTACACAGGTGGATCGGCTACAAGACATAAAGAAGGGAGGAGGAGAAGGAGGAGTACGAGGAACAGGTAGCAGTAAGCGAAGACATGGTAGGAAACAAAAGGTTGCATCTGGGCATGATGTTTCCTCCAATGAGATCTCCGGTATTTCGGCATAG 594 0.4461 MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGDFLNEMAAMMSQTKPNENGEESFEELQQLFEDMFQSDIGCSGSDSHTAASCSASSTQVDRLQDIKKGGGEGGVRGTGSSKRRHGRKQKVASGHDVSSNEISGISA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5327g00005 197 Gene3D DnaJ domain 7 137 IPR036869 -
Pral5327g00005 197 CDD DnaJ 10 70 IPR001623 -
Pral5327g00005 197 SMART dnaj_3 9 73 IPR001623 -
Pral5327g00005 197 Pfam DnaJ domain 10 78 IPR001623 -
Pral5327g00005 197 PANTHER PUTATIVE, EXPRESSED-RELATED 2 182 - -
Pral5327g00005 197 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Pral5327g00005 197 MobiDBLite consensus disorder prediction 183 197 - -
Pral5327g00005 197 MobiDBLite consensus disorder prediction 136 153 - -
Pral5327g00005 197 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pral5327g00005 197 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pral5327g00005 197 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pral5327g00005 197 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral5327g00005 197 MobiDBLite consensus disorder prediction 136 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5327g00005 Pral-Chr5327 37723 42059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5327g00005 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 2.68e-10 57.0