Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5327g00003 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCCGTTTTATCTGATGCGAATAAGCGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGATTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAAGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTTGTTCTGCATCATCTACGTACGTAACTTACTCTGAAACTTCCACTTCTAACAAACGCAATTCCTCGGAGATGAATGTTGGGAAGAATGCGGATTCTCTTGACTTTGAAGCCACCTTCCAGGACTTCTGTCTAGGGGTGGATCGGCTACAAGACATAAAGAAGGGAGGAGGAGAAGGAGGAGTACGAGGAACAGGTAGCAGTAAGCGAAGACATGGTAGGAAACAAAAGGTTGCATCTGGGCATGATGTTTCCTCCAATGAGATCTCCGGTATTTCGGCATAG 708 0.4463 MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGDFLNEMAAMMSQTKPNENGEESFEELQQLFEDMFQSDIGCSGSDSHTAASCSASSTYVTYSETSTSNKRNSSEMNVGKNADSLDFEATFQDFCLGVDRLQDIKKGGGEGGVRGTGSSKRRHGRKQKVASGHDVSSNEISGISA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5327g00003 235 CDD DnaJ 10 70 IPR001623 -
Pral5327g00003 235 SMART dnaj_3 9 73 IPR001623 -
Pral5327g00003 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pral5327g00003 235 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Pral5327g00003 235 MobiDBLite consensus disorder prediction 221 235 - -
Pral5327g00003 235 Pfam DnaJ domain 10 78 IPR001623 -
Pral5327g00003 235 Gene3D DnaJ domain 7 137 IPR036869 -
Pral5327g00003 235 PANTHER PUTATIVE, EXPRESSED-RELATED 2 180 - -
Pral5327g00003 235 MobiDBLite consensus disorder prediction 193 235 - -
Pral5327g00003 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral5327g00003 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pral5327g00003 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5327g00003 Pral-Chr5327 19027 42059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5327g00003 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 4.04e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5327g00003 - - lang:109338829 313.923