Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00021 ATGGCTTCATCTTCCTCCCCTGCTCCATCTTCTCAATATCCAAAGCCACATGATATTTTTTTAAGTTTTAGAGGTGAGGACACCCGCGGAAATTTCACCAGCCATCTTTGCCATGCTCTTCGCAGAAGCGAAATAGAAACATTCACCGACGACGGAATTGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATTGAAGATTCAGCTCTGTTCCTTGTGGTGTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAACTTGCAAAAATATTAGACCTCTGCAGAAATCAAGATCACCTTGTTATACCTGTGTTCTATAAAGTAGATCCTTCAGACGTGAGGAAGCAGTCTGGGAGTTACAAGAAAGCACTTGAAGAACATGAGCGCAAAGGCATCAACACGCAACAACTGCGCCAGTGGAGGGAGGCTCTCGCTAAAGCCGCTGGTATATCTGGTTTCCCCATCACCGATAGTGATAATGAAGCACACGAAATTGAAAAAATAGTGGAAAGTGTCAACAAAAGGTTGCGCAAACAGTATCCCGAAGATAATGGAGAAGACTTGATTGGAATTGAAGAGAAAATGCAACACGTAGAATTATTGTTGGACAAGGAGTCCAACGATGTCCGAATCATTTGCATTTGGGGGATGGGCGGTATGGGCAAAACAACCCTTGCAAGAGCATTATTTAAGAGGCGGCGTTATAAATACGAAGGGTCTGTCTTTATGGAAAAAGTGGGAGAAAAATCAAAGAATCGCGGAATAGAGGATGTGAAGAAAGATCTTATTTCGGAATTATTTGGGGATAAAAATGCTCACACTAGCCCTTACGACAAGAGGAGACTTCAACGGAAAGAAGTTTTCATTGTTTTGGATGATGTTGATAGTTATGATCAAGTAAACGATTTGGTTGGAAGGCGCGATTTGTTTAGACCAGGTAGTAAAATCTTAGTAACAACTAGAAATAAAAAAATCCTTGGTGCTAAGGTAGATGTAGATCGTGATGCTATATATGAACTGAAGGGTTTGGATTCTGAGGAGGCTTTTCAACTTTTCTCTTTACACGCCTTTGGAAAAGACCGCCCTGCCCCTGACCCAAAACTAAGAGAGTTGGCACAGAAATTGACTAGGTATGCAAATGGAAATCCACTGGCCCTGAAAGTTTTAGGTTCCTCCTTGGCTAATGAGAAAAATCAAGAAGTCTGGGAAAGCCGATTAGAAAAACTTCAAAAATTACCAGATCCACAAATTAACGAAGTCCTAAAAGTAAGTTTTGAAGGACTTGAGGCTGGAGAGAAAGAGAGTTTCTTGGATATCGCATGTCTTTTACCCGAATATAATTATTTTATGGGATGTCTTTCAACTGATGGTGTTGAGGCGGTAAAAGATTTGTTAAAAGCCCGACGTGGTTATGCAGTCCATTTTGAATTGGAAAGACTTAAAGAGACGGCTCTTTTAGAAGTTGATGAATCTGGGAGCATATCAATGCACGATCTGCTAAGAGAAATGGGTCGACAGGCTGTTCGTGATGAGTCACCAAAGCATCCTAGAAAGCGCAGTCGATTATGGGATCCTAAAGAAATATCTGAAATATTGGGGGCAAAAAAGAGAAGTAAAGCCATTGAAGTTGTAAGCCTGAACCTTCAAGAAGTTGGAGAGATGCGCTTAAGTCGTAGAGCCTTTCGTTCAATGCCCAACCTAAAGATTCTTAATTTTTATTCTTATCACAAAATCTTTGGTGGGGATGAAGTCAAGGTAGAAATTCCTGATGGATTAGACTTTTTGCCAGAAGGACTCATAAAATTGTGTTGGACGGCATACCCTTGTGCGTCCTTGCCGGCAACATTCAAGGCTGAAAATCTTGTTGAATTCCAAATGCCCAAGAGCAATTTGACAAGACTTTGGGATGGAGTGCAGAATCTTGTGAACTTAAGCAAAATTACGCTCCGTCAATCAAAAGAGTTGATTGAACTCCCAGATTTTTCCAAGGCCACAAGTCTTAAACATGTTGATCTCGAGTGGTGCTCAAAATTGCGGAGTGTACATCCATCTATTTTATCTCTCCCCAGCCTGTGTCGTTTATCGCTACGCTGTTGCCTGTCCCTTACCAGCCTTACAAGCGATACCCATCTCCAATCTCTCATTAAGCTCGATGTACTTGGGGTTAAGTCTGGAGGAATTTTCAGTGACCTCAAAAAAGAAGAGCTCGATTTACAACTTTCAGCATCTGCCATCAGTGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCATTCATTGTCTCTAAGAGGTTGCGGAAATGTGACAAGCGTTCACAAATTGATTAAGCTGCGTGGCCTTCGACGTCTTGATGCTGGAGGGTGTAATAAGCTAGCATCACCTCTCCTGTCCAAGTGTGATAAGATGGGTGCTTTGCGAATTCTATCGCTTCGGTATTGCTATGAATTATCTGAACTTCCTGATGACATCAGCTTCCTGTCATCATTACGTCAGTTGGATCTCTCAGAGACTCATGTAGAGACCTTGCCTTCGAGCATCAAACATCTTTCACGCCTTCAACGTCTTCAACTGGATGGATGTAAAAGGCTTCGTCGTCTACCAGAGCTCCCTCCCTCTATCTTGACATTGACTGCCACCGACTGCACATCCCTTCAGACCATAGAATCCCTTGAGACCATACAATATTCACCTTCGACAAACGAAGGTGAAAAAGGAAAATATAACGCATGGCCGCGGTTTTTATTCACAAATTGCGAGAAGCTGAATCGACGGGCAATCAAAGCTGCTGAGGCAAGAGTCCTACTTGAGGTAAAGAAAGCCACTTATGACTATGCTGGATTGGAATATCCAGGAAAAAGAGTTCCAAAGTGGTTCATGTATAGGGATAAAGGGTCTTCGGTGTCTGTGAATCTCAGTTCGATTCCAAATTCTGAGGATGGGGGATTCCTTTTTTGCGCCGTCTTTTCTAAATTACCACCATGGTGGGGAGGAAACATTGATGTCAAATGGTTTATTGATGGTAAATATGCTTGCGGGCCCACTGAAAGATTGTTTTACCTGGGTGGGCCGGCGTTCTCAAAGTATGTTGATCTTTGGCATGTCGGTCTTTGGTATGATCCTGATTCACTTGGAGAACTAAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCAACATGGAGCTTAAAGTTAAATTCGAAGGTTGTAGCATAACAGAGATCAAAAGGTGTGGGGTATGCCCGACATCTGCAGTTGAATATCAAGATGGTGACATTAAACAAGTTCAATTGCCATTGCCTCCTCAGCCTGGCTCTAATGCAATGGAAGCGGCCTCTCGAAAGCGCAAATATCGCAGCTAG 3381 0.4268 MASSSSPAPSSQYPKPHDIFLSFRGEDTRGNFTSHLCHALRRSEIETFTDDGIEKGDEVWPSLEKAIEDSALFLVVFSENYASSTWCLKELAKILDLCRNQDHLVIPVFYKVDPSDVRKQSGSYKKALEEHERKGINTQQLRQWREALAKAAGISGFPITDSDNEAHEIEKIVESVNKRLRKQYPEDNGEDLIGIEEKMQHVELLLDKESNDVRIICIWGMGGMGKTTLARALFKRRRYKYEGSVFMEKVGEKSKNRGIEDVKKDLISELFGDKNAHTSPYDKRRLQRKEVFIVLDDVDSYDQVNDLVGRRDLFRPGSKILVTTRNKKILGAKVDVDRDAIYELKGLDSEEAFQLFSLHAFGKDRPAPDPKLRELAQKLTRYANGNPLALKVLGSSLANEKNQEVWESRLEKLQKLPDPQINEVLKVSFEGLEAGEKESFLDIACLLPEYNYFMGCLSTDGVEAVKDLLKARRGYAVHFELERLKETALLEVDESGSISMHDLLREMGRQAVRDESPKHPRKRSRLWDPKEISEILGAKKRSKAIEVVSLNLQEVGEMRLSRRAFRSMPNLKILNFYSYHKIFGGDEVKVEIPDGLDFLPEGLIKLCWTAYPCASLPATFKAENLVEFQMPKSNLTRLWDGVQNLVNLSKITLRQSKELIELPDFSKATSLKHVDLEWCSKLRSVHPSILSLPSLCRLSLRCCLSLTSLTSDTHLQSLIKLDVLGVKSGGIFSDLKKEELDLQLSASAISGALRSSSGHRSKIHSLSLRGCGNVTSVHKLIKLRGLRRLDAGGCNKLASPLLSKCDKMGALRILSLRYCYELSELPDDISFLSSLRQLDLSETHVETLPSSIKHLSRLQRLQLDGCKRLRRLPELPPSILTLTATDCTSLQTIESLETIQYSPSTNEGEKGKYNAWPRFLFTNCEKLNRRAIKAAEARVLLEVKKATYDYAGLEYPGKRVPKWFMYRDKGSSVSVNLSSIPNSEDGGFLFCAVFSKLPPWWGGNIDVKWFIDGKYACGPTERLFYLGGPAFSKYVDLWHVGLWYDPDSLGELKRKIEERKRNGQSNMELKVKFEGCSITEIKRCGVCPTSAVEYQDGDIKQVQLPLPPQPGSNAMEAASRKRKYRS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00021 1126 Gene3D - 178 337 IPR027417 -
Pral5326g00021 1126 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 777 IPR044974 GO:0006952
Pral5326g00021 1126 SMART till_3 16 154 IPR000157 GO:0007165
Pral5326g00021 1126 Gene3D Ribonuclease Inhibitor 539 738 IPR032675 -
Pral5326g00021 1126 Pfam Leucine rich repeat 811 866 IPR001611 GO:0005515
Pral5326g00021 1126 Pfam TIR domain 17 193 IPR000157 GO:0007165
Pral5326g00021 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 443 IPR027417 -
Pral5326g00021 1126 MobiDBLite consensus disorder prediction 1103 1126 - -
Pral5326g00021 1126 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral5326g00021 1126 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral5326g00021 1126 Gene3D - 346 433 IPR042197 -
Pral5326g00021 1126 Pfam NB-ARC domain 198 415 IPR002182 GO:0043531
Pral5326g00021 1126 Pfam Leucine Rich Repeat 624 643 IPR011713 -
Pral5326g00021 1126 Gene3D - 15 177 IPR035897 -
Pral5326g00021 1126 Gene3D Ribonuclease Inhibitor 739 907 IPR032675 -
Pral5326g00021 1126 PRINTS Disease resistance protein signature 383 397 - -
Pral5326g00021 1126 PRINTS Disease resistance protein signature 853 869 - -
Pral5326g00021 1126 PRINTS Disease resistance protein signature 215 230 - -
Pral5326g00021 1126 PRINTS Disease resistance protein signature 285 299 - -
Pral5326g00021 1126 Pfam C-JID domain 955 1087 IPR045344 -
Pral5326g00021 1126 SUPERFAMILY L domain-like 500 890 - -
Pral5326g00021 1126 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00021 Pral-Chr5326 105854 110675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00021 762 886 WRKY Transcription Factor Family AT4G12020 32.667 6.36e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00021 - - pcin:129290874 841.262