Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00018 ATGGCATCATCATCATCTCAGTTCTCTCGAATAAAACATGATGCCTTTATCAGCTTTTGCGGCACAGATACACGTTCTGGTTTTCTTAGTCATTTGAAAAAAGAATTGCGGCATAAGCAAATTGATGCCTTCGTGTATGATAATAAGCTTGAGAGAGGAGATCTAATATCACCAGAACTTTCTGTAGCAATAGAAGAATCATTCATTTCGCTTATCATATTTTCAAAGAGCTATGCTTCTTCGACATGGTGCTTGAAACAACTGGTGAAAATCATGGAGTGCAAGGACAAATATCAACAGATTGTGATTCCTGTTTTCTACGACATTGATCCAACAGATGTAAGGCACCAAAAGGGGTATTATGCAGATGCTTTAGCTCAGCATGACTCAAGTTACAAGGAAGAGGTGCCAAATTGGAAATATGCCTTGAATAAAGCTGCTAATTTATCTGGATTTCATTCATCAAAGTATGGGGATGAAGCTAAGCTTATTGAAGAAATTGCCAAATCCATGTCAAACAAGTTGAATAATGTGTATCAAAGTGACTTCACAGACCTTGTTGGCATTGATGAAAGAATTGCAGATTTAGAATCTCTAATGGATCAAGGGTTAGAAGATGTCCGTGTCATTGGAATTTGGGGCATGGGCGGGATTGGCAAGACAACTATTGCTGCAGCAGTTTTTAATCGATTTTGTTCTGAATATGAAGGTTGTTGTTTTTCGGCAAATGTAAGGGAAGAATCAAAGAAAGGTGGGATTATCCATGTGAAGAACAAAATTCTTTCTATACTACTGAAGGAAAATGATTTATACATTGGCACTCCCTATGGTGTACCCCCTTATGTGAAGAGAAGGCTTCTCCGGAAAAAGGTTCTTGTTGTTCTTGATGATGTTAATGATTTGGGTCAACTAGAAAATTTAGTTGGAGCATTTGATTGTTTTGGACCAGGTAGTAGAATCATTATTACAACTAGAGATAAGGAAGTACTTGGTCAAAAGGTTGACAAAATTTATGAGGTGAAGCCACTGGATTATGAAAAAGCACTCCAACTTTTCAACATGAATGCCTTTAAACAAAGCTTTCTAGACATGGAATGGAGTGAGCTATCAAAGAGGATGGTTGCGTATGCTAAGGGACTTCCATTGGCTCTTAAAGTTTTGGGTTCTTTTCTCTATGGGAAAAGTAAAGAAGAATGGAAAAGCCAGTTGAAAAAGTTGGAGAAAAAGCCATTCAAAAAAATCCATGATTTGTTGAGATTGAGCTACAATAGTCTAGACCGCCAACAGAAAGAGATCTTTTTGTATATCGCATGTCTTTTCAAAGGATATCAATATCGTGAAATAATAGCTCTTCTAGATGCTTGTGGTTTTACAACAACTATTGAGTTAAAAGTGCTTCGAGACAAAGCTCTTATAACTGAAGTCATTAATTTAGTATCTAAAAAGCCCATGGTATCTATGCATGATTTGATACAGGAAGTGGGCTGGGAGGTTGTTCGTGAAGAATCAATAAAAGATCCTGGAAAACGCAGTCGTTTATGGGATCCTGATGATATTTATGAAGTACTGATAAATAATATGGGGACTGAAACGATTCAAAGCATAAGTCTGGACATGACAACAACTGGAGATCTGTCCTTAAATCCTCAAGTCTTTGCTAGGATGCACAAGATGAAGTTTCTTAAAATATTTACTCAGATATCTTCCTTGGATGCACGTGTTCATCTACCTCAAGGCCTTGAATTTTTGCCCAATGAACTAAGAATTCTTCTTTGGCAGAATTACCCTTTGAAATTCCTGCCTCCAACATTTTCTGCAGAAAATCTTGTTCAACTTGTTATGAACTACAGCAATGTGGAAAAACTTTGGGATGGAGTTGTGCCTCTTGTGAATTTAAAGAAATTTGACCTCAGGCACTCTACGAATCTGCTAGCTCTCCCAGATTTTTCTACGGCCAATAATCTTGAATCGGTCTCACTGTTCAGTTGTAAGAACTTGCCTCTTGTTCATCCATCTATTTTATCTCTCCAAAAGCTTGAGTCCTTGGATCTATCATACTGCGAAAAGCTTACCAGTCTTGTGAGTGATATACCTTTGAAATCCCTCCGATCACTCCGTCTAGCTTGCTGCTCAAGACTGAAGAAATTCTCATTGACATCAGAGAACATGAGAGAGTTAGATTTATCAGAGACAGCTATTGAGGAATTGCCATTGTCCTTAGGATGTCTCAGCCAGCTTGAAACATTATCTCTATGGCGTTGTGAAAGTCTCAAGCATCTTCCAGATAACTTGGTTGGCTTGAGATCTCTGCGTTATCTCAAGGTAACTGGTTGTATGAAACTTCAATCTCTACCAGAGCTTCCACCATCCATTGAAACATTATGGGCTTCAGAGTGTTCTTCCTTGGCGACCGTACCAGTATCTTCTGATCCACTCAACACAAACATGAAGGAAATTCGTCTGGCAAATTGCATGAACTTGGATGAAAATTTGCTCAATGATATTGGATGGAACATTCATCTCAAGCTGATGAATCATTATGCATTTGAACGGGTATCCTCAGAAGACCAGGAGGAGCAAATTGATGTTTATGTTCGAACTGGAGGAATATACCCTGGAAGCAAAGTTCCAAACTGGTTCAAGTATAGAACATCTCAGGCTTCGATAACTATTGGTGTGAAATTCAATATTCCTGATGCCTTCATTTTCTGCGTGGTTCTTTCTCAGTTCCCATTAAGCAGTTTCCTTATCTCCATCGCAGTTGACTGCTTCCTGGAAAACAATGATGGTGAGAAGCTTCATGTTAAGTCTTTGGACCTCGTGTTGCCTGGCACAGAGCTTAATTCAGATCATGTGTGTTTATTTTACGTCGAATGTTTGGGTTTTATAACTGGAAGGATTGAAGAAAGTAGAGACTGTTATGAGCACAAAGTTTCATTCGAATTCTCGGCTCAGTCAGAGGTTGAGCAAGAAGAGGAGGATAAAGAGCAAGAAGAGGAGGATAAAGAGATTGTGATAAAAGGGTGTGGGGTTTACCCGATATATGCCTCGCAACTTAATTTCATAGGGGATGTTAACAGGTTAAAACCCAGAAAAGTTGGAGTTCAGAGCTGTGATGAGCTCCGGCCACTTCCTCCGTTGTTGGAAGCCGGTGAAGCCATTGATGATCCTGAAAGTTCTGGTGAGAAGAAAGATGAGGAAGAGAGAGTCTTTTTAGCTCAAAAATCCAGCGGATATATATTTTCACCACTTCCAACTGGAACATGGAAGAAACCAACTCAAGGCTTGAAAGATCTTGTCAACCTATGA 3309 0.3905 MASSSSQFSRIKHDAFISFCGTDTRSGFLSHLKKELRHKQIDAFVYDNKLERGDLISPELSVAIEESFISLIIFSKSYASSTWCLKQLVKIMECKDKYQQIVIPVFYDIDPTDVRHQKGYYADALAQHDSSYKEEVPNWKYALNKAANLSGFHSSKYGDEAKLIEEIAKSMSNKLNNVYQSDFTDLVGIDERIADLESLMDQGLEDVRVIGIWGMGGIGKTTIAAAVFNRFCSEYEGCCFSANVREESKKGGIIHVKNKILSILLKENDLYIGTPYGVPPYVKRRLLRKKVLVVLDDVNDLGQLENLVGAFDCFGPGSRIIITTRDKEVLGQKVDKIYEVKPLDYEKALQLFNMNAFKQSFLDMEWSELSKRMVAYAKGLPLALKVLGSFLYGKSKEEWKSQLKKLEKKPFKKIHDLLRLSYNSLDRQQKEIFLYIACLFKGYQYREIIALLDACGFTTTIELKVLRDKALITEVINLVSKKPMVSMHDLIQEVGWEVVREESIKDPGKRSRLWDPDDIYEVLINNMGTETIQSISLDMTTTGDLSLNPQVFARMHKMKFLKIFTQISSLDARVHLPQGLEFLPNELRILLWQNYPLKFLPPTFSAENLVQLVMNYSNVEKLWDGVVPLVNLKKFDLRHSTNLLALPDFSTANNLESVSLFSCKNLPLVHPSILSLQKLESLDLSYCEKLTSLVSDIPLKSLRSLRLACCSRLKKFSLTSENMRELDLSETAIEELPLSLGCLSQLETLSLWRCESLKHLPDNLVGLRSLRYLKVTGCMKLQSLPELPPSIETLWASECSSLATVPVSSDPLNTNMKEIRLANCMNLDENLLNDIGWNIHLKLMNHYAFERVSSEDQEEQIDVYVRTGGIYPGSKVPNWFKYRTSQASITIGVKFNIPDAFIFCVVLSQFPLSSFLISIAVDCFLENNDGEKLHVKSLDLVLPGTELNSDHVCLFYVECLGFITGRIEESRDCYEHKVSFEFSAQSEVEQEEEDKEQEEEDKEIVIKGCGVYPIYASQLNFIGDVNRLKPRKVGVQSCDELRPLPPLLEAGEAIDDPESSGEKKDEEERVFLAQKSSGYIFSPLPTGTWKKPTQGLKDLVNL 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00018 1102 Gene3D - 7 176 IPR035897 -
Pral5326g00018 1102 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 177 - -
Pral5326g00018 1102 ProSiteProfiles TIR domain profile. 11 175 IPR000157 GO:0007165
Pral5326g00018 1102 SUPERFAMILY "Winged helix" DNA-binding domain 412 523 IPR036390 -
Pral5326g00018 1102 MobiDBLite consensus disorder prediction 1047 1068 - -
Pral5326g00018 1102 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
Pral5326g00018 1102 Gene3D - 343 426 IPR042197 -
Pral5326g00018 1102 Gene3D - 177 340 IPR027417 -
Pral5326g00018 1102 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 717 IPR044974 GO:0006952
Pral5326g00018 1102 Gene3D Ribonuclease Inhibitor 697 840 IPR032675 -
Pral5326g00018 1102 Pfam TIR domain 12 189 IPR000157 GO:0007165
Pral5326g00018 1102 SMART till_3 12 149 IPR000157 GO:0007165
Pral5326g00018 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Pral5326g00018 1102 Pfam C-JID domain 871 1019 IPR045344 -
Pral5326g00018 1102 PRINTS Disease resistance protein signature 377 391 - -
Pral5326g00018 1102 PRINTS Disease resistance protein signature 674 690 - -
Pral5326g00018 1102 PRINTS Disease resistance protein signature 209 224 - -
Pral5326g00018 1102 PRINTS Disease resistance protein signature 285 299 - -
Pral5326g00018 1102 SUPERFAMILY L domain-like 536 842 - -
Pral5326g00018 1102 Pfam NB-ARC domain 198 426 IPR002182 GO:0043531
Pral5326g00018 1102 Gene3D Ribonuclease Inhibitor 518 696 IPR032675 -
Pral5326g00018 1102 Coils Coil 981 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00018 Pral-Chr5326 86154 90172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00018 7 819 WRKY Transcription Factor Family AT4G12020 33.098 5.33e-116 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00018 - - gmx:100799103 1003.05