Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00017 ATGTGGAATGGAAAAGTTCAGTTGGCTTCAACAGTTGAACTTTATTTCACGGAGACTGTCATGGACCCGGAGCGAGAGAGAATTAAAAGTGGATGTCAGAAGATTCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTACACTCATTGGTAATGATGAGAGAAATAGCCCGTGGGGTTGTCGATGATAGAGATAGAAAGGTGACAAAGAATGACGTGCTTAGCGCATTGCGCAACAGTATCGAGAAAATGGTGTGTGCATCCAGGGATATTATTGAAGTAATAAGCAGGGTGTCGTTTGAAGGCTTGGATGACCAAAGAGTGCATTTAGTATTGAGGATGAAAGAAATTGCACATGGGATTGCTGATAAACAAGCAAGAGCTGCAATAACTAGGCATGACATGCTTGCGGAACAAGTTGCGGTTGGTTATGACGGGATAGGTTATAGTCCCATGGCTGAGTCAGCAAAAACCAGCAATGGTGATGTCCTGATAGATGGGGGACAAGGCATGATAAATGAAAATGAGATGTTGGAGGTAGAACATGTGTTAGGACTTGAAAATGGAATAGATGAAGTACCGGAGTCCCTGTTGCCATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCTGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTCACTCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAGTTCTACCATGTCATACCATCAATTTTGGTAGATAAATTGACAGATTCTGCTCGCAGTATACTATGTAAAGAACCAAATTGTGTGGAGATCAATTGTCAAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATTTACTGTTTCTTTTTAAGCATATTGGCATGCCTTCTGAGAGCCAGGTCTACGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGTCTGGAGGTTTTTTTGGTCTTGCTAGCTTTGAAGGTCTTGATGCCTAACAGAGTATATCTACTACGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGCGGACAAAATATGGTGGCCAAGGTGAAGATGTATATAATAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTGCTCATGGAGGGCTTTTTCGTAGTATAAAGGCTGCCCCTTTGCGAAAGCCAAAGAGAAAGAAGACTCAAAGAGTGGATCTTGGCTCATTAACTGAGTTATCCGAAGTTAAAAGATCTTCTGTAGATTGCCCTCATGAAGGTCCTAGCGTATTATTGAGTGACGTTGTTTGGTCAAAACCATCTAAAAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTAGGTCTATGGTGGGGTCCTGATTGCACTGAAGCTTTCTTAAAACAGAACAGATTGAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGTTGGTCAGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGACGGAGAATCAGGAAAATTATATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATTTTGAAATCGCCTGATTTTGAAAGTCCTAGTTTTCACTCGTTTAAATCTGCAGAAAGACCAAAGGTGGATCCTTATATTTATTATGATGCTGATGAAATGGACTTCAGCAAACTAGACTCTCCGCAAATGAATGCACAGGCCTCAACCTCTGGTATTTCATCTGCCCAAAGATCTTATCCAGCAGGCGTGATGCCAGAGTTTGACTTCGCGGCATTGGGCATTTATAATGCCCCATCTTGGAATGTCCAGCTTCCTGATGGTTCAGGTGGTACCCAAGCTGTGCAGCTTCCAAGGGCTCCTCTGGTGGAAGGACTGCCTCTTCCTCAAAACATACAGGAACCTCACAAGGCTGCTTATGAGTATTTGTTTGAGCTCATTGCTTCCTTAAAGCTTGTGCTTATGAACAGGGAGACTGATAACCGGACAAGTCAGTCAGCTTTGCGAGGTAGAGCTAGAAAACGAAAAGGAGGAAGCAGTAATTAG 2133 0.4233 MWNGKVQLASTVELYFTETVMDPERERIKSGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVLSALRNSIEKMVCASRDIIEVISRVSFEGLDDQRVHLVLRMKEIAHGIADKQARAAITRHDMLAEQVAVGYDGIGYSPMAESAKTSNGDVLIDGGQGMINENEMLEVEHVLGLENGIDEVPESLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFYHVIPSILVDKLTDSARSILCKEPNCVEINCQEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQVYVFNGNYVDKGAWGLEVFLVLLALKVLMPNRVYLLRGNHESRYCTARYGFKKEVRTKYGGQGEDVYNKCLECFKELPLASVIGGCVYTAHGGLFRSIKAAPLRKPKRKKTQRVDLGSLTELSEVKRSSVDCPHEGPSVLLSDVVWSKPSKKDGLRDNTGRKLGLWWGPDCTEAFLKQNRLKLIIRSHEGPDARVGQDDFGDMLCGYSLDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFESPSFHSFKSAERPKVDPYIYYDADEMDFSKLDSPQMNAQASTSGISSAQRSYPAGVMPEFDFAALGIYNAPSWNVQLPDGSGGTQAVQLPRAPLVEGLPLPQNIQEPHKAAYEYLFELIASLKLVLMNRETDNRTSQSALRGRARKRKGGSSN 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00017 710 ProSitePatterns Serine/threonine specific protein phosphatases signature. 343 348 IPR006186 GO:0016787
Pral5326g00017 710 MobiDBLite consensus disorder prediction 688 710 - -
Pral5326g00017 710 SUPERFAMILY Metallo-dependent phosphatases 244 576 IPR029052 -
Pral5326g00017 710 PRINTS Serine/threonine phosphatase family signature 524 540 IPR006186 GO:0016787
Pral5326g00017 710 PRINTS Serine/threonine phosphatase family signature 279 306 IPR006186 GO:0016787
Pral5326g00017 710 PRINTS Serine/threonine phosphatase family signature 309 336 IPR006186 GO:0016787
Pral5326g00017 710 PRINTS Serine/threonine phosphatase family signature 379 405 IPR006186 GO:0016787
Pral5326g00017 710 PRINTS Serine/threonine phosphatase family signature 342 366 IPR006186 GO:0016787
Pral5326g00017 710 Gene3D - 216 603 IPR029052 -
Pral5326g00017 710 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 53 694 - -
Pral5326g00017 710 SMART pp2a_7 247 568 IPR006186 GO:0016787
Pral5326g00017 710 Pfam Calcineurin-like phosphoesterase 279 498 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00017 Pral-Chr5326 71784 84109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00017 211 490 Calmodulin-binding Proteins AT5G63870 53.265 1.11e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00017 K04460 - qsa:O6P43_002566 947.962