Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00016 ATGGACCCGGAGCGAGAGAGAATTAAAAGTGGATGTCAGAAGATTCTGGAAGGAATAGATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTACACTCATTGGTAATGATGAGAGAAATAGCCCGTGGGGTTGTCGATGATAGAGATAGAAAGGTGACAAAGAATGACGTGCTTAGCGCATTGCGCAACAGTATCGAGAAAATGGTGTGTGCATCCAGGGATATTATTGAAGTAATAAGCAGGGTGTCGTTTGAAGGCTTGGATGACCAAAGAGTGCATTTAGTATTGAGGATGAAAGAAATTGCACATGGGATTGCTGATAAACAAGCAAGAGCTGCAATAACTAGGCATGACATGCTTGCGGAACAAGTTGCGGTTGGTTATGACGGGATAGGTTATAGTCCCATGGCTGAGTCAGCAAAAACCAGCAATGGTGATGTCCTGATAGATGGGGGACAAGGCATGATAAATGAAAATGAGATGTTGGAGGTAGAACATGTGTTAGGACTTGAAAATGGAATAGATGAAGTACCGGAGTCCCTGTTGCCATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCTGATGATTGCATCACCTTAGAGTGGGTTCAAGACATGATGTTCACTCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAGTTCTACCATGTCATACCATCAATTTTGGTAGATAAATTGACAGATTCTGCTCGCAGTATACTATGTAAAGAACCAAATTGTGTGGAGATCAATTGTCAAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATTTACTGTTTCTTTTTAAGCATATTGGCATGCCTTCTGAGAGCCAGGTCTACGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGTCTGGAGGTTTTTTTGGTCTTGCTAGCTTTGAAGGTCTTGATGCCTAACAGAGTATATCTACTACGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGCGGACAAAATATGGTGGCCAAGGTGAAGATGTATATAATAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTGCTCATGGAGGGCTTTTTCGTAGTATAAAGGCTGCCCCTTTGCGAAAGCCAAAGAGAAAGAAGACTCAAAGAGTGGATCTTGGCTCATTAACTGAGTTATCCGAAGTTAAAAGATCTTCTGTAGATTGCCCTCATGAAGGTCCTAGCGTATTATTGAGTGACGTTGTTTGGTCAAAACCATCTAAAAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTAGGTCTATGGTGGGGTCCTGATTGCACTGAAGCTTTCTTAAAACAGAACAGATTGAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGTTGGTCAGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGACGGAGAATCAGGAAAATTATATACACTTTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATTTTGAAATCGCCTGATTTTGAAAGTCCTAGTTTTCACTCGTTTAAATCTGCAGAAAGACCAAAGGTGGATCCTTATATTTATTATGATGCTGATGAAATGGACTTCAGCAAACTAGACTCTCCGCAAATGAATGCACAGGCCTCAACCTCTGGTATTTCATCTGCCCAAAGATCTTATCCAGCAGGCGTGATGCCAGAGTTTGACTTCGCGGCATTGGGCATTTATAATGCCCCATCTTGGAATGTCCAGCTTCCTGATGGTTCAGGTGGTACCCAAGCTGTGCAGCTTCCAAGGGCTCCTCTGGTGGAAGGACTGCCTCTTCCTCAAAACATACAGGAACCTCACAAGGCTGCTTATGAGTATTTGTTTGAGCTCATTGCTTCCTTAAAGCTTGTGCTTATGAACAGGGAGACTGATAACCGGACAAGTCAGTCAGCTTTGCGAGGTAGAGCTAGAAAACGAAAAGGAGGAAGCAGTAATTAG 2073 0.424 MDPERERIKSGCQKILEGIDSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVLSALRNSIEKMVCASRDIIEVISRVSFEGLDDQRVHLVLRMKEIAHGIADKQARAAITRHDMLAEQVAVGYDGIGYSPMAESAKTSNGDVLIDGGQGMINENEMLEVEHVLGLENGIDEVPESLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFYHVIPSILVDKLTDSARSILCKEPNCVEINCQEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQVYVFNGNYVDKGAWGLEVFLVLLALKVLMPNRVYLLRGNHESRYCTARYGFKKEVRTKYGGQGEDVYNKCLECFKELPLASVIGGCVYTAHGGLFRSIKAAPLRKPKRKKTQRVDLGSLTELSEVKRSSVDCPHEGPSVLLSDVVWSKPSKKDGLRDNTGRKLGLWWGPDCTEAFLKQNRLKLIIRSHEGPDARVGQDDFGDMLCGYSLDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFESPSFHSFKSAERPKVDPYIYYDADEMDFSKLDSPQMNAQASTSGISSAQRSYPAGVMPEFDFAALGIYNAPSWNVQLPDGSGGTQAVQLPRAPLVEGLPLPQNIQEPHKAAYEYLFELIASLKLVLMNRETDNRTSQSALRGRARKRKGGSSN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00016 690 MobiDBLite consensus disorder prediction 668 690 - -
Pral5326g00016 690 SUPERFAMILY Metallo-dependent phosphatases 224 556 IPR029052 -
Pral5326g00016 690 SMART pp2a_7 227 548 IPR006186 GO:0016787
Pral5326g00016 690 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Pral5326g00016 690 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Pral5326g00016 690 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Pral5326g00016 690 PRINTS Serine/threonine phosphatase family signature 504 520 IPR006186 GO:0016787
Pral5326g00016 690 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Pral5326g00016 690 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 674 - -
Pral5326g00016 690 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Pral5326g00016 690 Pfam Calcineurin-like phosphoesterase 259 478 IPR004843 GO:0016787
Pral5326g00016 690 Gene3D - 196 584 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00016 Pral-Chr5326 71784 84277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00016 191 470 Calmodulin-binding Proteins AT5G63870 53.265 1.03e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00016 K04460 - qsa:O6P43_002566 947.962