Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00012 ATGGGTGGTTCTGGAAAGTGGTTGAAATTACTCATCTCTTCAAAAAAGCCCTCTCCAAATGATCGAACTGATGCTGATAAGAGCAAGAAGAAATGGAGGCTATGGAGGAATTCTTCTGAGGGGATGGGCCCATCCACGAAAAGCAAGACGAAGAAGAGAAACGGGGTCGTATCAGACAAGTCGGGCCCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCGCCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGTTTGTCTCCAGACAGGAAACACACTCAAGCAAATTCTCTTGAGCAGGCTGAGAAAGGATGGTGCGACACTCCAGGAAGTGTGGATGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTTTCTACACAGCAATCAAGAGCGAGTGCCAGTCCAAACTCGAGAATCTCAAGGCCAATGTCTCCGCTGAAGCATGATAATCTAGACACTAGGAGCTTGTTAGAGCGGTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCGCCGGATAGGACTCCATTATCAAGGAAAAATGATAACTTTGTTCTCCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGCTTCGTGCACATCCCCTGAGGAAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACGGAGTCAACCAAGGCTAAACAGAGAGCTTGCAAGTGTTCCTCCCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGAACCTTCCATTAATTTTTGGAGAGACTGTTATGCGACACCTCAGAGGGCAAGTTATCAGAGGAGATACTCCAGGAGATGA 1176 0.4753 MGGSGKWLKLLISSKKPSPNDRTDADKSKKKWRLWRNSSEGMGPSTKSKTKKRNGVVSDKSGPLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSLEQAEKGWCDTPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQQSRASASPNSRISRPMSPLKHDNLDTRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKNDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSASCTSPEEKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTSGSEPSINFWRDCYATPQRASYQRRYSRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00012 391 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Pral5326g00012 391 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Pral5326g00012 391 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Pral5326g00012 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 131 IPR027417 -
Pral5326g00012 391 MobiDBLite consensus disorder prediction 207 225 - -
Pral5326g00012 391 SMART iq_5 88 110 IPR000048 GO:0005515
Pral5326g00012 391 SMART iq_5 111 132 IPR000048 GO:0005515
Pral5326g00012 391 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Pral5326g00012 391 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Pral5326g00012 391 MobiDBLite consensus disorder prediction 207 229 - -
Pral5326g00012 391 Gene3D - 88 141 - -
Pral5326g00012 391 MobiDBLite consensus disorder prediction 1 61 - -
Pral5326g00012 391 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00012 Pral-Chr5326 41220 44374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00012 1 380 IQD Protein Family AT1G72670 47.381 1.26e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00012 - - ahf:112710157 389.808