Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00011 ATGGGTGGTTCTGGAAAGTGGTTGAAATTACTCATCTCTTCAAAAAAGCCCTCTCCAAATGATCGAGAAAAGACTGATGCTGATAAGAGCAAGAAGAAATGGAGGCTATGGAGGAATTCTTCTGAGGGGATGGGCCCATCCACGAAAAGCAAGACGAAGAAGAGAAACGGGGTCGTATCAGACAAGTCGGGCCCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCGCCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGTTTGTCTCCAGACAGGAAACACACTCAAGCAAATTCTCTTGAGCAGGCTGAGAAAGGATGGTGCGACACTCCAGGAAGTGTGGATGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTTTCTACACAGTCAAGAGCGAGTGCCAGTCCAAACTCGAGAATCTCAAGGCCAATGTCTCCGCTGAAGCATGATAATCTAGACACTAGGAGCTTGTTAGAGCGGTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCGCCGGATAGGACTCCATTATCAAGGAAAAATGATAACTTTGTTCTCCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGCTTCGTGCACATCCCCTGAGGAAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACGGAGTCAACCAAGGCTAAACAGAGAGCTTGCAAGTGTTCCTCCCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGAACCTTCCATTAATTTTTGGAGAGACTGTTATGCGACACCTCAGAGGGCAAGTTATCAGAGGAGATACTCCAGGAGATGA 1179 0.475 MGGSGKWLKLLISSKKPSPNDREKTDADKSKKKWRLWRNSSEGMGPSTKSKTKKRNGVVSDKSGPLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSLEQAEKGWCDTPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQSRASASPNSRISRPMSPLKHDNLDTRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKNDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSASCTSPEEKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTSGSEPSINFWRDCYATPQRASYQRRYSRR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00011 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 133 IPR027417 -
Pral5326g00011 392 MobiDBLite consensus disorder prediction 16 38 - -
Pral5326g00011 392 MobiDBLite consensus disorder prediction 1 63 - -
Pral5326g00011 392 Gene3D - 90 143 - -
Pral5326g00011 392 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
Pral5326g00011 392 SMART iq_5 90 112 IPR000048 GO:0005515
Pral5326g00011 392 SMART iq_5 113 134 IPR000048 GO:0005515
Pral5326g00011 392 MobiDBLite consensus disorder prediction 208 226 - -
Pral5326g00011 392 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Pral5326g00011 392 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Pral5326g00011 392 MobiDBLite consensus disorder prediction 208 230 - -
Pral5326g00011 392 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Pral5326g00011 392 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00011 Pral-Chr5326 41220 44374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00011 1 381 IQD Protein Family AT1G72670 47.143 1.01e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00011 - - ahf:112710157 387.882