Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00010 ATGGGTGGTTCTGGAAAGTGGTTGAAATTACTCATCTCTTCAAAAAAGCCCTCTCCAAATGATCGAGAAAAGACTGATGCTGATAAGAGCAAGAAGAAATGGAGGCTATGGAGGAATTCTTCTGAGGGGATGGGCCCATCCACGAAAAGCAAGACGAAGAAGAGAAACGGGGTCGTATCAGACAAGTCGGGCCCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCGCCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGTTTGTCTCCAGACAGGAAACACACTCAAGCAAATTCTCTTGAGCAGGCTGAGAAAGGATGGTGCGACACTCCAGGAAGTGTGGATGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTTTCTACACAGCAATCAAGAGCGAGTGCCAGTCCAAACTCGAGAATCTCAAGGCCAATGTCTCCGCTGAAGCATGATAATCTAGACACTAGGAGCTTGTTAGAGCGGTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCGCCGGATAGGACTCCATTATCAAGGAAAAATGATAACTTTGTTCTCCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGCTTCGTGCACATCCCCTGAGGAAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACGGAGTCAACCAAGGCTAAACAGAGAGCTTGCAAGTGTTCCTCCCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGAACCTTCCATTAATTTTTGGAGAGACTGTTATGCGACACCTCAGAGGGCAAGTTATCAGAGGAGATACTCCAGGAGATGA 1182 0.4746 MGGSGKWLKLLISSKKPSPNDREKTDADKSKKKWRLWRNSSEGMGPSTKSKTKKRNGVVSDKSGPLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSLEQAEKGWCDTPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQQSRASASPNSRISRPMSPLKHDNLDTRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKNDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSASCTSPEEKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTSGSEPSINFWRDCYATPQRASYQRRYSRR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00010 393 MobiDBLite consensus disorder prediction 209 227 - -
Pral5326g00010 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 133 IPR027417 -
Pral5326g00010 393 MobiDBLite consensus disorder prediction 16 38 - -
Pral5326g00010 393 MobiDBLite consensus disorder prediction 1 63 - -
Pral5326g00010 393 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Pral5326g00010 393 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Pral5326g00010 393 MobiDBLite consensus disorder prediction 209 231 - -
Pral5326g00010 393 Gene3D - 90 143 - -
Pral5326g00010 393 SMART iq_5 90 112 IPR000048 GO:0005515
Pral5326g00010 393 SMART iq_5 113 134 IPR000048 GO:0005515
Pral5326g00010 393 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Pral5326g00010 393 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Pral5326g00010 393 PANTHER IQ-DOMAIN 5-RELATED 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00010 Pral-Chr5326 41220 44374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00010 1 382 IQD Protein Family AT1G72670 47.268 9.61e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00010 - - ahf:112710157 392.889