Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5326g00001 ATGGCTCGCGGGAGAATAAGGGCAAGGATACGAAGGAGCAATCTTTACACATTTGCCTGCCTTCGACCCAGAACCACTGAGGAGGGGGCCCATTCCCTTGAAGGCCCAGGGTTCTCACGAACTGTTTATTGCAACCAACCTCATCTCCATGAAAAGAAGCCTCTACATTACTGCAAAAATCATATATCAACCACAAAATATAATGTTATCTCATTTTTGCCCAAGGCTCTCTTTGAGCAATTTCGACGAGTTGCTAATATATATTTTCTTTTGGCTGCATGCCTCTCAGTTTCTCCAATTTCACCTTTCACACCAGTGAGCATGATTGCTCCTTTAGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAGGCACTGGAAGATTGGCGGAGGTTTCTTCAAGATATCAAAGTTAATCGTCGGAAGGTTAGTGCCCATAAAGGCGATGGTGTTTTTGACTTGAAGGCATGGCAGAAGATAAGGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAATTTTTCCCTGCTGACTTGCTTCTGTTGTCATCAAGTTATGATGATGGTATATGCTATGTTGAAACTATGAATTTAGACGGTGAAACGAACTTGAAAGTGAAGAGATCATTGGAGGTTACCTTGCCTCTTGATAATGATGACGCTTTTAAGGATTTTACTGGTACAATGCAATGTGAAGACCCAAATCCCAATCTTTACACATTTGTTGGTAACATTGAGTACGAACGTCAGGTTTATCCCATTGATCCTATTCAAATTCTTCTCCGAGATTCAAAGCTGAGAAACACTGACCATGTCTATGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTGATGCAGAATTCTACAAAGTCCCCTTCAAAAAGGAGCAGAATAGAAAAGAAGATGGATTATATCATATATCTCCTTTTCACGGTCCTTATTTTAATATCTATGATAAGTTCCATAGGATTTGCTATAAAAACCAAGTTTCAAACTCCAGACTGGTGGTACCTACGGCCCAAGGAAGCTGAGTACCAATATAATCCCAACAATGCTGCCTTGGCTGGGATGAGCCATCTTATTACTGCGCTCATTCTTTATGGATATTTGATACCCATATCACTCTATGTGTCAATTGAGCTTGTGAAGGTTCTACAAGCAAGCTTCATCAACAAAGACTTGCAAATGTTTGATGAAGAAACTGGGACTCCAGCTGATGCACGAACTTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTTTCTGACAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAATGTTCCATTGCTGGTACGGCATATGTGCACTCCAGTGAAGTTGAACTCGCTGCAGCAGAGCAGATGGCTTCTGACTTTCAGGGGCAGGAGTCAGATCTCTCTAATTTTCCCATGCCTCAGAATAAAGCACGTGGTTTGAGTGACAGTAATAGAATAGGTGAAGAAATTGAAATGGAGCCTGTTGTTACCTCTAAGAGTGATGAAAATAAAAAGCCTGCAATAAAGGGATTTAATTTTGAGGACAACCGGATCATGAACTGCAACTGGTTGAAAGAGGCCAATCCTGATGTTCATTTGTTGTTTTTCCGGATATTGGCAGTTTGCCATACTGCCATTCCCGAGCTGAATGAGGAGACTGGCAGTTTTACATATGAAGCTGAATCACCTGATGAGGGGGCTTTTCTTGCAGCTGCCAGAGAATTTGGTTTTGAGTTTTGTAAAAGGAATCAATCGAGTATTTTCATCCGTGAAAGACTGTCTCCTTCTGGACATCCAGTTGAAAGGGAGTACAAAATCCTGAATTTGTTGGACTTCACTAGTAAAAGAAAACGGATGTCTGTAGTTGTACGTGATGAGGACGGAAACATTCTTCTCATGTGCAAGGGGGCAGACAGTATTATATTTGATCGATTGGCAAAGAATGGAAAAACATATTTGGAGGCTACTACTAGACATTTAAATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAACTTGATGAGCAAGAGTACTCTGCTTGGAATAATGAATTCCAGAAAGCCAAAGCAGCTGTTGGGTCTGACCGAGAGGAAACACTTGAACGGTTATCAGATATAATGGAGAGGGAGTTGATTCTTGTTGGAGCTACTGCTGTTGAAGACAAACTGCAGAAAGGGGTGCCCCAGTATGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACTGGAGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTGCTTCGACGGGGCATGAAGCAGATATGTATAACTACTATGAACTCAGATTCATTAACCAACGGTGGAAAAGAGGCCATCAAGGAGAACATTCTGAACCAAATCAGCAATGCCTCACAAATGATCAAGCTGGAGAAAGATCCCCATGCTGCATTTGCATTAATTATTGATGGTAAAACTCTGACATATACATTGGAAGATGATATGAAGCACCAGTTTCTGGGATTGGCAGTAGAATGTGCATCTGTCATCTGCTGTCGCGTGTCTCCCAAGCAAAAGGCTCTGGTAACAAGGTTGGTGAAGGAAGGAACTGGGAAGACCACTCTAGCAATAGGCGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCGGATATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCAGTGATGGCCAGTGACTTTGCCATTGCCCAATTTCGGTTTTTGGAGCGTCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGGTA 2817 0.4192 MARGRIRARIRRSNLYTFACLRPRTTEEGAHSLEGPGFSRTVYCNQPHLHEKKPLHYCKNHISTTKYNVISFLPKALFEQFRRVANIYFLLAACLSVSPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDIKVNRRKVSAHKGDGVFDLKAWQKIRVGDVVKVEKDQFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDNDDAFKDFTGTMQCEDPNPNLYTFVGNIEYERQVYPIDPIQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISMISSIGFAIKTKFQTPDWWYLRPKEAEYQYNPNNAALAGMSHLITALILYGYLIPISLYVSIELVKVLQASFINKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGXHSSEVELAAAEQMASDFQGQESDLSNFPMPQNKARGLSDSNRIGEEIEMEPVVTSKSDENKKPAIKGFNFEDNRIMNCNWLKEANPDVHLLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLAAAREFGFEFCKRNQSSIFIRERLSPSGHPVEREYKILNLLDFTSKRKRMSVVVRDEDGNILLMCKGADSIIFDRLAKNGKTYLEATTRHLNEYGESGLRTLALAYRKLDEQEYSAWNNEFQKAKAAVGSDREETLERLSDIMERELILVGATAVEDKLQKGVPQCXDKLAQAGLKIWVLTGDKMETAINIGFACSLLRRGMKQICITTMNSDSLTNGGKEAIKENILNQISNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMV 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5326g00001 941 Gene3D - 432 463 IPR023299 GO:0000166
Pral5326g00001 941 Gene3D - 720 921 IPR023214 -
Pral5326g00001 941 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 941 - -
Pral5326g00001 941 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Pral5326g00001 941 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 940 IPR023298 -
Pral5326g00001 941 NCBIfam phospholipid-translocating P-type ATPase 57 941 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral5326g00001 941 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Pral5326g00001 941 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Pral5326g00001 941 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Pral5326g00001 941 Gene3D - 562 700 IPR023299 GO:0000166
Pral5326g00001 941 Gene3D - 119 288 - -
Pral5326g00001 941 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Pral5326g00001 941 FunFam Phospholipid-transporting ATPase 118 288 - -
Pral5326g00001 941 FunFam Phospholipid-transporting ATPase 724 921 - -
Pral5326g00001 941 Gene3D - 419 431 IPR023214 -
Pral5326g00001 941 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Pral5326g00001 941 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 941 IPR032630 -
Pral5326g00001 941 NCBIfam HAD-IC family P-type ATPase 853 941 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5326g00001 941 SFLD p-type atpase 405 932 IPR044492 -
Pral5326g00001 941 FunFam Phospholipid-transporting ATPase 591 722 - -
Pral5326g00001 941 SFLD C1.7: P-type atpase like 405 932 - -
Pral5326g00001 941 Pfam Cation transport ATPase (P-type) 546 650 - -
Pral5326g00001 941 SUPERFAMILY HAD-like 410 925 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5326g00001 Pral-Chr5326 10 5496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5326g00001 1 941 Primary Pumps ATPases AT1G72700 74.735 0.0 1484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5326g00001 K01530 - gmx:100819559 1580.84