Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5322g00044 ATGGGCTTCTTTTCTCATATGTCGCTTCATTTTGGATTATGTATTTTTCCTTTAGCTAGCCACGTCCTTTTTCTCTGTATATCATCATCAACCGCTCTAGACATTGCCACAGATACAGAAGCTTTGATCTCGTTTAAGTCTCAGTTGAGTAATATTGATCCTCCTCACCCTTTATCTTCTTGGAACCAGAGTTCATCATCCCCCTGCAACTGGTATGGTGTAACCTGCAACAGGCTTCGTCAAAGAGTTATAGACTTGAATCTTTCGGGCTTAAGGCTCTCAGGTCAGTTGAGCCCAAGTATAGGTAATCTCTCTTTTCTTGAGTCCCTCCAGTTGCGGGGAAACCAATTCACAGGAGTGATTCCAGACCAAATTGGCCATCTCATTCGGTTAAGATCTCTAGACTTGAGCTCTAACAGAATAGAGGGCATGCTTCCTTCAAACATCACTCGCTTGGCCAACCTCGTTACACTCAACTTATCCTCCAACTATATAGTCAGTCAAATTCCTCAGGATATTGACAGCTTAACAAAGCTTCAAGTCTTGAGAATGGGAAGCAATAGACTATACGGTGTAGTTCCACCAACTCTAGGGAACATTTCATCTCTTACAAATATCAGTTGGCTCAAGAACTTAATTGAGCTTGATCTCACTATTAACAATCTCACTGGGGCTATTCCTTCTTCTATATATAACTTATCTTCCCTTGTTAACTTGGCTGTAGCTGACAATGATTTCTGGGGTGTTATTCCTCAGGATATTGGTCACAGACTTCCAAAACTTCTAGTGTTCAATATCTGCTTTAATAGATTCACAGGTAGAATTCCTTGGTCTTTGCATAATCTCACCAACATTCAAGTTATTCGCATGGCATCCAACCTTTTGGAAGGAACGGTGCCACCAGGTCTTGGAAATCTCCCCTTCCTTCGTATGTACAATATAGGGTATAACAGGATAGTAAGCTCAAAAGATGGAGGCCTGGAGTTCATTGCTTCATTGGCAAACTGCACCCTCTTGAGCTTTCTCGCAATTGATGGCAATAGGTTGGAAGGTGTAATTCCAGAGACTATTGGAAATTTCTCCAAGGTCCTCTCCAAATTATACATGGGAGGGAATCGTTTCCATGGAAACATACCCCCCTCAATTGGGAATCTTAGAGGCTTGAGTTTACTAAACTTGAGTTACAATGCAATCTCAGGAGAAATTCCTTTCGAGTTAAGCCAACTGGAGAAACTACAGGAGCTTAGCCTAGCAGGGAATCAGATATCTGGAAGCATTCCAAACTCCCTTGGACGTCTCCAAATGTTGAACAGGCTTTATTTGTCTGGCAATCAGCTTGGGGGTGAAATACCTTCAAGTTTTGGGGATTTTCAGAATATTGTCTTCATGGACTTATCTCACAACAAGCTCAATGGAAGCATACCTAGAGAAGTACTCAGTCTCTCATCTCTTAGCACAATTTTAAACATGTCTAAGAACCTTCTAAGTGGCTCTTTGCCTCAAGAAGTAGGGAGTTTGATCAAAGTCTCAACCTTAGACTTCTCAGACAATCTTTTAGTTGGTGAAATCCCCAGCTCAATCAGCAATTGTCTAAGCCTAGAAAATCTATTTTTGGCACGAAATATGTTTTCTGGTTTTATTCCCAAAGCTCTTGGAAGCATCAGAGGCTTGGAAATTCTAGACCTTTCCTCCAATCAAATCTCTGGATCTGTTCCAGTTGAACTTCAAAATCTAAATGCCCTTCGGTTATTGAACCTTTCTTATAACGACTTAGAAGGAGTCATTCCCAGTGCTGGAGTTTTCAAGAATATCTCTTCTTTCCATTTTGAAGGAAATGAAAAACTCTGTTTGCTCTCATCATGTGTTACTCAAGGGCGTGGAAGAAAGATGCTCATAATTTATATCACCATACCTGTTGTGGTAACATTCACACTATGTTTCATTTTGGGCTTGCTATTATATGTGAGAAGCCGTAGAACAAAGGCAATAACACCACTTGAAATGGCAAAGCCATATCATCCAATGGTCTCTTATGATGAGCTTCGACGAGCAACTAGAAACTTCAGCCAAGAAAATTTATTGGGAATTGGAAGCTTTGGTTCGGTCTATAGAGGCTATCTCAGTGAAGAGAATGCTGTAGCAGTAAAAGTCCTAGATACTTCGAGATCAGGCTCCTTGAAGAGTTTCTATGCAGAATGTGAGGCTTTAAGGAATGTAAGGCATCGAAATCTGGTTAAGCTAATCACATCATGTTCTAGTATAGACTTCAAGAACAAAGAATTTCTGGCTTTGGTTTACGAGTTCATGTCTAACGGCAACTTGGAAGATTGGATCAAGGGAAAGATAAAGCATGCAAATGGGAATGGGTTGAATCTTCTGGAGAGACTGAACATTGCTATTGATGTTGCTTGTGCAATGGAATATCTGCATGATGACAGTGAAACTCCTATTGTGCATTGTGATCTAAAGCCAAGCAATATTCTTTTGTGTGAAGATATGATTGCTAAGGTGGGTGATTTTGGATTGGCTAGGCTTATGATTGAGAGACCAACTAATCAGGTCTCGATAAGCTCCACTCATGTTCTAAGAGGTTCAATCGGTTACATACCTCCAGAGTATGGATGGGGAGAAAAACCATCGGCAGCAGGAGATACATACAGTTTTGGAATTATATTGTTGCAACTCTTTTCTGGGAGAAGTCCAACAGATGATCACTTCGCAGGTGGCCTGAGCTTAACAAGATGGGTGCAATCAGCATTCCCTGACAAGACTCTGCAAGTCATAGATCCTCAGCTTTTGTCCCACATTTTTCACAATGGCCTTGCTGATAGAGGTCCAAGTCTACAACTTGATTGTGTGAATGGAATTCTGGGAGTTGGGTTATCCTGCACTGCAGATTCTCCAGATGAACGTCTTAAGATGAAAGATGCTGCTACAAAATTAAAAATTGTTAGAGACAATCTTTCCAAACTCAATCAAAACTAG 2985 0.408 MGFFSHMSLHFGLCIFPLASHVLFLCISSSTALDIATDTEALISFKSQLSNIDPPHPLSSWNQSSSSPCNWYGVTCNRLRQRVIDLNLSGLRLSGQLSPSIGNLSFLESLQLRGNQFTGVIPDQIGHLIRLRSLDLSSNRIEGMLPSNITRLANLVTLNLSSNYIVSQIPQDIDSLTKLQVLRMGSNRLYGVVPPTLGNISSLTNISWLKNLIELDLTINNLTGAIPSSIYNLSSLVNLAVADNDFWGVIPQDIGHRLPKLLVFNICFNRFTGRIPWSLHNLTNIQVIRMASNLLEGTVPPGLGNLPFLRMYNIGYNRIVSSKDGGLEFIASLANCTLLSFLAIDGNRLEGVIPETIGNFSKVLSKLYMGGNRFHGNIPPSIGNLRGLSLLNLSYNAISGEIPFELSQLEKLQELSLAGNQISGSIPNSLGRLQMLNRLYLSGNQLGGEIPSSFGDFQNIVFMDLSHNKLNGSIPREVLSLSSLSTILNMSKNLLSGSLPQEVGSLIKVSTLDFSDNLLVGEIPSSISNCLSLENLFLARNMFSGFIPKALGSIRGLEILDLSSNQISGSVPVELQNLNALRLLNLSYNDLEGVIPSAGVFKNISSFHFEGNEKLCLLSSCVTQGRGRKMLIIYITIPVVVTFTLCFILGLLLYVRSRRTKAITPLEMAKPYHPMVSYDELRRATRNFSQENLLGIGSFGSVYRGYLSEENAVAVKVLDTSRSGSLKSFYAECEALRNVRHRNLVKLITSCSSIDFKNKEFLALVYEFMSNGNLEDWIKGKIKHANGNGLNLLERLNIAIDVACAMEYLHDDSETPIVHCDLKPSNILLCEDMIAKVGDFGLARLMIERPTNQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDTYSFGIILLQLFSGRSPTDDHFAGGLSLTRWVQSAFPDKTLQVIDPQLLSHIFHNGLADRGPSLQLDCVNGILGVGLSCTADSPDERLKMKDAATKLKIVRDNLSKLNQN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5322g00044 994 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Pral5322g00044 994 ProSiteProfiles Protein kinase domain profile. 688 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00044 994 Coils Coil 974 994 - -
Pral5322g00044 994 CDD STKc_IRAK 694 982 - -
Pral5322g00044 994 SUPERFAMILY Protein kinase-like (PK-like) 667 981 IPR011009 -
Pral5322g00044 994 SUPERFAMILY RNI-like 214 597 - -
Pral5322g00044 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Pral5322g00044 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 659 768 - -
Pral5322g00044 994 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Pral5322g00044 994 SUPERFAMILY L domain-like 62 317 - -
Pral5322g00044 994 Gene3D Transferase(Phosphotransferase) domain 1 769 993 - -
Pral5322g00044 994 SMART serkin_6 688 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00044 994 PANTHER OS04G0122200 PROTEIN 209 979 - -
Pral5322g00044 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 327 624 - -
Pral5322g00044 994 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Pral5322g00044 994 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Pral5322g00044 994 Pfam Leucine rich repeat 364 422 IPR001611 GO:0005515
Pral5322g00044 994 Pfam Protein kinase domain 689 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00044 994 Gene3D Ribonuclease Inhibitor 34 208 IPR032675 -
Pral5322g00044 994 Gene3D Phosphorylase Kinase; domain 1 652 768 - -
Pral5322g00044 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 769 994 - -
Pral5322g00044 994 Gene3D Ribonuclease Inhibitor 326 623 IPR032675 -
Pral5322g00044 994 Gene3D Ribonuclease Inhibitor 209 323 IPR032675 -
Pral5322g00044 994 SMART LRR_typ_2 578 603 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 128 151 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 282 306 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 481 506 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 176 199 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 209 233 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 104 127 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 554 577 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 152 175 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 433 456 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 385 406 IPR003591 -
Pral5322g00044 994 SMART LRR_typ_2 409 432 IPR003591 -
Pral5322g00044 994 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 219 326 - -
Pral5322g00044 994 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5322g00044 Pral-Chr5322 324659 327826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5322g00044 37 990 Receptor kinase-like Gene Family AT3G47570 41.809 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5322g00044 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5322g00044 - - gmx:100783512 1280