Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5322g00021 ATGTGGAGATTCAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTTGAAGGCCGTTCTATTGATGTTGGTAATCTTAAAGTAAATGTCCTGAAGGCGATTGCTGAGGGAGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTAAACATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTAGTAAAGAAGGAGATCTCAGTCATGAAGTCATTGAAAGGGCATCCCAATGTTGTCACACTTTATGCTCATGCAATCTTTGATATGGGTAGGACAAAAGAGGCTTTCCTTGTTATGGAATTTTGTGATAAGTCTCTAGTTAGTGTGCTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAAGCAAGTTCTTCTAATCTTCAGGGATGTATGTAACGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGGGACTTGAAAGCTGAGAATCTTTTGTTTGGCCCAGATGGTTTATGGAAATTATGTGATTTCGGGAGTACTTCCACCAACCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACAACTCCTGCCTATAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATCAATGAGAAAGTGGATATATGGGCATTGGGGTGTCTCCTTTTCCGTATATGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAGTTGCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCAAAATACAGTTCATCCCTTACGGACCTAATCAGAGATATGCTTCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTCAATGAGCAGTTACCTATTGATCTGCAGAAGTCATTACCTGAGAGACCACCTGAATTGCTATCTTCCAACAATCATGAAGGTTCTGCAAAGCCTGCAACTCAATCATTGCCAATGCCTCGTCGGAGTCCACCTCCTCCACCTTCATCTGGAGAAACTAAAAGTTCATCGCAGTCATCCCATTCTTCTAGGGGAGGGGGAAGTGGAGGGCAGCTTGGCGCATTCTGGTCTACTATGCATGCAAAGGACTCATCTGCCTCGGAGGTTAAGAGCAGACCAATGTTTGATGAAGAACCATCTGGCGATCATGTCTCAGCAAAACATGATAGAATTCGTCCAGACAATAACCAACTACCCAAAAATGTTAGTGGTAAAAAAGTGGATGTTGGACAACCACAAAATGTGAAAAACAGCGAACATGGAAAATCATACAAACTAGATGCCGTATCTTCCAGGGACTTTGAAATAAAATTTTACCAGGACACACATCTTGCTGGTGAGAGGCGAGCTTCTTCAAGTAAGGAGAACGCAACCTCCTTTCAAGACAAAGCTTTTGACACATTTGTTGCTGAATTTGATACCAGTAAGCTTAGCCCTGGATTCAGTGATAAAAAATCTGAGAAAGAGGAAGCGTTAGAGGCTGAAGTGGAGAAACTCAGAGTGAAGCTGAAGGAAACTCAGCAGGAGAAAGCTGAAATAACTTCAAAGTACGAAAAGCTTTCTGCCATTTGCCGATCTCGAAGGCAAGAGATCCAGGATCTCAAGCAAACCCTTGCAGCAAGAACTCCATCGCCAAAGAAAGAGGGTCTGAGAGCCTCTCCTACAGTTCCATCATCTGCGGCTACGAAGGAGAAGGTTAGCGGGACGATGTGGGAACTCCCACAAAACAAAACTGAAATGAAAAGTCCCAGTTCAGAACCGAAGGCATGGCAAGCTTTTCCAGAGGAACCCCAGCAACAAAAGTCTGCTTCTGCGGACAATAATAGAGCCAAATCTGTGAGGACAAGAAAAATGCATCAAAACGAGCAACCAATTCAACCACATTCAGATTTTGATACATGGGGTTTTGAAACAGATGGTTTCGCTTCTGTATCTGCTGCTGGAAGCTCACAGATGCCCAGACCCCCTAGCACAGAAGGGAGTAATCCTCAGGCTTTTGGTAATGCCAAGACATACGAGGGCAAGTCAACTTCCCAACCTGCCGGGTGGGCTGGTTTCTAA 2097 0.4444 MWRFKPFMQKEPAGLEGRSIDVGNLKVNVLKAIAEGGFSCVYLARDAVNMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHAIFDMGRTKEAFLVMEFCDKSLVSVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLFGPDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPERPPELLSSNNHEGSAKPATQSLPMPRRSPPPPPSSGETKSSSQSSHSSRGGGSGGQLGAFWSTMHAKDSSASEVKSRPMFDEEPSGDHVSAKHDRIRPDNNQLPKNVSGKKVDVGQPQNVKNSEHGKSYKLDAVSSRDFEIKFYQDTHLAGERRASSSKENATSFQDKAFDTFVAEFDTSKLSPGFSDKKSEKEEALEAEVEKLRVKLKETQQEKAEITSKYEKLSAICRSRRQEIQDLKQTLAARTPSPKKEGLRASPTVPSSAATKEKVSGTMWELPQNKTEMKSPSSEPKAWQAFPEEPQQQKSASADNNRAKSVRTRKMHQNEQPIQPHSDFDTWGFETDGFASVSAAGSSQMPRPPSTEGSNPQAFGNAKTYEGKSTSQPAGWAGF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5322g00021 698 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00021 698 MobiDBLite consensus disorder prediction 607 621 - -
Pral5322g00021 698 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00021 698 MobiDBLite consensus disorder prediction 567 597 - -
Pral5322g00021 698 Coils Coil 494 535 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 546 698 - -
Pral5322g00021 698 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Pral5322g00021 698 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5322g00021 698 CDD STKc_GAK_like 26 298 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 309 324 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 302 438 - -
Pral5322g00021 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pral5322g00021 698 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 344 359 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 377 407 - -
Pral5322g00021 698 PANTHER SERINE/THREONINE PROTEIN KINASE 1 681 - -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 408 431 - -
Pral5322g00021 698 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Pral5322g00021 698 MobiDBLite consensus disorder prediction 655 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5322g00021 Pral-Chr5322 160280 164769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5322g00021 31 292 CBL-interacting serine-threonine protein kinases AT4G18700 29.137 7.49e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pral5322g00021 Pkinase 4.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5322g00021 K08853 - qsa:O6P43_001313 936.021