Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5322g00007 ATGAGTGTTATGTATAGTCCCAGTGTTCTGAATTACTCAGACGGGGAGCTTAGGAGAAACCCAGAAATGGATTCAATTCCCCACTTGAATTCTGGATTAATGAGGTACAGTTCTGCTCCAAGCTCATTTCTGGCAAGCCTTGTTCAGAATAGCCACGGCTGTGTGAATGAGGGAGCCTCTAGAAGCGTAGATCATCATGATCATCATCACAATCCATCTTCAAGTTCAGAAATGGAAGCGATGTTGGCCAAGTTGGTTTCTTCATCATCAAACAATGAATGGATGAAGCAGGAAGAAGCAGGGGACTCTGTTTCTGAGAGACCCAGTGGGTATAATTCTAATTATGGTCCTCAGATGATTTACCAATCTCAGACTCAGCAAGCTGTTCAGGGCTTGCCAAACGGGTCTGTAGGTTCTTCTGGGAATGATTTTGATGGCTCATTCAATTCCACTGAGTCCAAAATAAGGTCAAATAATCTCCTTAGGCAGAAAAGCTCCCCTGCTGGACTGTTCAACAATTTCTCAGTTGAAAATGGTTTTGCGACATGGAGAGATGTGGGAAGCTTTAGTGCCTGTGATCATGTCTCAAATGGCCAAGCTTCTACATCAGTTAGTGGCTTAAATGATAATACTCTAGCCTTCTCATCTAAACCATCTTCTTGTTCAAAACACTTGCCTGATATAGCAGAAGATGGAAATGAAACCCTAGAAGAAGCAACTTGTGTGGATGGCAGAAGAAATCTGACAAATGACAGAAATGGCAATAACACTGAATGTTACATTCCCAGTTTTACAAGTGACTTCTGGGATGGTCCTTCATTCAATGACACCAAAACAGCCAGTGACAATGATGAACTCATGTTTTCTACTACTTCAAATGGTTTTGAAACTCAGAATGGTGATTTTGGATATCAGAATGTTGGTTTGACTCATCATTTGAGTCTGCCTAGTTCTTCTACAAAGTCAAAGATGGATGCCGTTGAGAAGTTTCTTCAAGTTCAGGGATCTGTTCCTTGTAAGATTCGAGCTAAAAGAGGTTTCGCCACCCACCCACGGAGCATTGCAGAGAGGGTAAGAAGAACACGAATCAGTGAAAGAATAAAGAAATTGCAAGATCTCTTCCCAAAATCTGAAAAGCAAACAAGCACAGCAGATATGTTGGATTTAGCAGTTGATTATATTAAAGATTTGCAGAAACAAGTTAAGATGCTCACAGATACTAAAGCAAAGTGCAAGTGTTCAAGTAACCAGATGCAGAACTCAGTTCCTTGTAGCTAG 1278 0.4108 MSVMYSPSVLNYSDGELRRNPEMDSIPHLNSGLMRYSSAPSSFLASLVQNSHGCVNEGASRSVDHHDHHHNPSSSSEMEAMLAKLVSSSSNNEWMKQEEAGDSVSERPSGYNSNYGPQMIYQSQTQQAVQGLPNGSVGSSGNDFDGSFNSTESKIRSNNLLRQKSSPAGLFNNFSVENGFATWRDVGSFSACDHVSNGQASTSVSGLNDNTLAFSSKPSSCSKHLPDIAEDGNETLEEATCVDGRRNLTNDRNGNNTECYIPSFTSDFWDGPSFNDTKTASDNDELMFSTTSNGFETQNGDFGYQNVGLTHHLSLPSSSTKSKMDAVEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVDYIKDLQKQVKMLTDTKAKCKCSSNQMQNSVPCS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5322g00007 425 MobiDBLite consensus disorder prediction 59 74 - -
Pral5322g00007 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Pral5322g00007 425 SMART finulus 353 403 IPR011598 GO:0046983
Pral5322g00007 425 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 418 - -
Pral5322g00007 425 Pfam Helix-loop-helix DNA-binding domain 353 398 IPR011598 GO:0046983
Pral5322g00007 425 MobiDBLite consensus disorder prediction 75 98 - -
Pral5322g00007 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 413 IPR036638 GO:0046983
Pral5322g00007 425 MobiDBLite consensus disorder prediction 57 111 - -
Pral5322g00007 425 Gene3D - 349 421 IPR036638 GO:0046983
Pral5322g00007 425 FunFam Transcription factor bHLH130 family 348 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5322g00007 Pral-Chr5322 41414 44177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5322g00007 23 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.491 4.03e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5322g00007 HLH 3.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5322g00007 - - gmx:100795896 450.669