Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00025 ATGTCCGTGTCCCCGAACCACCTAGTAAATCTTGACTTGTTCTGCAATGAAGCAGCTAGCGAGGTGGTTTCATCGGATTCCAATATTACCAACTGTGAGTCATTGGCGGTTTCGAGTGTCTCATGGGATTCCGATGATGAAAGCTGTGTCTTAACCTTACTAGATTCCGAGGTTGATCAAGTACAGGAAAGACAACAGTCACTTGCACTGCTTCATGAAAAAGCATGGCTCAGAACTGCTCGAGAAGAAGCCATAAAGTGGATGCTAAAGGTGCAAGGCTACTACAGTTTTACACCAGGGACAGCATATCTATCTGTGAACTATCTTGATCGTTTTCTTTTGTCACACCCACTGCCGAAAGATGAAGCATGGCCTTTGCAGCTAGTAGCCGTTGCCTGTCTGTCTGTGGCAGCAAAAATGGAAGAAACAAGGGTGCCACTTTTAGTAGACTTACAAATGATAGAGCCTAGGTTCTTGTTTAAGCCTAAAACGGTTCAAAGAATGGAGCTTTTGGTTATGGCCACTCTCAGGTGGCGATTGCGTGCTGTTACTCCTTTCGATTTCGCTCATCTTTTCATTGCTAAGGCCAAGCTATCATGCTCTGCCTCCTACCACATTATTTCTCGTGTCTCTGATGTTATAATCAGAACATGCTTAGTGATCGATTTCTTAGAGTATCCTCCATCTGCAATAGCGGCCGCTGCTCTGCTTTGGACAACCAATCAGTATGTTGATGAACAGAATCTAAGCTTCTTCCACGAAAATATAAGCAGAGAGATGGTCCAGAAATGTTACAACCTCATGAAACAGAGGAGTTTCCGATCAGAACATTTTGCAACAACGACTTTAGATTCATTGCCCCTAAGTCCTACTTGTGTGCTTGATCTTGCAGCTACGCAAGAAAGCAGCAAGGATCACAAGCCCTGA 927 0.4423 MSVSPNHLVNLDLFCNEAASEVVSSDSNITNCESLAVSSVSWDSDDESCVLTLLDSEVDQVQERQQSLALLHEKAWLRTAREEAIKWMLKVQGYYSFTPGTAYLSVNYLDRFLLSHPLPKDEAWPLQLVAVACLSVAAKMEETRVPLLVDLQMIEPRFLFKPKTVQRMELLVMATLRWRLRAVTPFDFAHLFIAKAKLSCSASYHIISRVSDVIIRTCLVIDFLEYPPSAIAAAALLWTTNQYVDEQNLSFFHENISREMVQKCYNLMKQRSFRSEHFATTTLDSLPLSPTCVLDLAATQESSKDHKP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00025 308 SMART cyclin_7 86 174 IPR013763 -
Pral5319g00025 308 CDD CYCLIN_AtCycD-like_rpt2 183 268 - -
Pral5319g00025 308 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Pral5319g00025 308 Pfam Cyclin, C-terminal domain 183 272 IPR004367 -
Pral5319g00025 308 PANTHER CYCLINS 66 274 IPR039361 -
Pral5319g00025 308 Gene3D - 72 181 - -
Pral5319g00025 308 SUPERFAMILY Cyclin-like 165 287 IPR036915 -
Pral5319g00025 308 FunFam D6-type cyclin 64 178 - -
Pral5319g00025 308 Pfam Cyclin, N-terminal domain 68 180 IPR006671 -
Pral5319g00025 308 Gene3D - 182 265 - -
Pral5319g00025 308 SUPERFAMILY Cyclin-like 70 180 IPR036915 -
Pral5319g00025 308 CDD CYCLIN_AtCycD-like_rpt1 80 178 - -
Pral5319g00025 308 FunFam D6-type cyclin 179 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00025 Pral-Chr5319 188039 189689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00025 1 280 Core Cell Cycle Gene Families AT1G70210 40.278 2.73e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00025 K18810 - gmx:100799323 351.288