Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00014 ATTGAGAAGTTTTTGAAAGACTATAGAGCTCTCAAGTCCACCAGATATTCTTATGCTGAAATCAAGAGAATTACCAATCAGTTTGAAGTCAAGTTAGGGGAAGGGTCTTTCGGTATTGTGTTCAAAGGAAACATTCCATCTAAGTTCAAGGTTGCAGTGAAGATCCTCACTAATTCTGAAGGAAATGGTGAAGAGTTCATCACTGAAGTTGGAACAATGGGTAAAATCCATCATGTCAACATTATTCACTTAATGGGCTTCTGTGCTGATGGCTTTAGGAGAGCACTGGTTTACAAATACTTTCAAAATGGTTCATTACAAAATTTCATAAATTCACCAGGCAATAGGCAAAACTTTGTTGGATGGAAAAAGCTCTATGAGATTGCTTTAGGTACAGCCAAAGGAATTGATTATCTTCATCAAGGCTGTGAGCAATGCATACTTCATTTTGACATCAAATCTCATAATATTCTATTGGATGATGACTTGACTCCAAAAATATGTGATTTGGGGTTGGCTAAACTGTGTTCCAAGGATCAAAGCATAGTGTCAATGACAAACGCTAGAGGAACATTGGGTTACATTGCTCCAGAAGTCTTCTCACGAAATTTTGGAAATATATCTCACAAAGCAGATGTTTATCGTTTTGGAATGTTGCTACTTGAATTAATAGGAGGAAGAAGGATTACCCATGACACAAAAGAAAATGCTCCCCACATTTACTATCCCGAATGGATCTATAATATTTTAGAAGAAAAGGAGGATGTGAGGATTCATATTGAGGAAGAAGGGGATGCTAAAATTGCAAGAAAATTGGGAATGGTAGGCCTGTGGTGCATTCAATGGCATGCTGTGGATCGACCATCAATGCAAGTAGTTCTTCAAATGTTGGAAGGAGAAGGAGACAGATTACCAATGCCTCCAAATCCTTTTAATTCTGATGGTCCTTCAACAAGAGAAAGGGTTAATGTACAAGCAAGAAATCTGATGCAAGGTTTAGCAATAATCCAGGGAGTAGAGTGA 1023 0.3783 IEKFLKDYRALKSTRYSYAEIKRITNQFEVKLGEGSFGIVFKGNIPSKFKVAVKILTNSEGNGEEFITEVGTMGKIHHVNIIHLMGFCADGFRRALVYKYFQNGSLQNFINSPGNRQNFVGWKKLYEIALGTAKGIDYLHQGCEQCILHFDIKSHNILLDDDLTPKICDLGLAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNISHKADVYRFGMLLLELIGGRRITHDTKENAPHIYYPEWIYNILEEKEDVRIHIEEEGDAKIARKLGMVGLWCIQWHAVDRPSMQVVLQMLEGEGDRLPMPPNPFNSDGPSTRERVNVQARNLMQGLAIIQGVE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00014 340 Gene3D Phosphorylase Kinase; domain 1 4 100 - -
Pral5319g00014 340 SUPERFAMILY Protein kinase-like (PK-like) 11 298 IPR011009 -
Pral5319g00014 340 Gene3D Transferase(Phosphotransferase) domain 1 101 303 - -
Pral5319g00014 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Pral5319g00014 340 ProSiteProfiles Protein kinase domain profile. 26 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00014 340 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 316 IPR045874 GO:0004672
Pral5319g00014 340 FunFam PR5-like receptor kinase 101 308 - -
Pral5319g00014 340 FunFam serine/threonine-protein kinase PBS1-like 2 100 - -
Pral5319g00014 340 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Pral5319g00014 340 SMART serkin_6 26 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00014 340 Pfam Protein kinase domain 29 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00014 Pral-Chr5319 134753 135775 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00014 16 310 Receptor kinase-like Gene Family AT1G66910 49.667 1.84e-103 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00014 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00014 - - aprc:113873873 504.982