Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00012 ATGACAAGGGACATGTGTTCCTTATCAACACAATTTCTGGTGGCTCTGTTTCTGATAATGTTATTCTGCAGAACTTGCAAGGCATCAGATGGTGGACACCAGAACTGTTCTCATTTGTGTGGACATCTTAATGTTAGCAGCCCTTTTCGGCTAAACGACTCTCCAGAGCAGTGTGGTTACCTCCGGTTTAACCTATCTTGCGAGCACAACCAACTGGTGATGTACTGGCAGTCTGGGAGATACAGTATTTCGTCCATTGATTATGAGAACCGCACAATTAGAGTGAGGGATGCTAATATTGTGGAGTTGGATTCCTCCTCCCCACCTGAGTATTCTTTAACATACTACAACTTCAGCAATGAAAATGAAGTTGTGACACGGTTTAGACGGTACGACGGCAATATGATGATGATGTTCGTGAAGTGTGAACACCCTCTGCATTCCCCTGGGTTTGTGGACACAGCCCCTTGCTTCAACACTTCAAAGGGGGCTGCAGCTTCTTCGTCTTCGTATTCGTATGTACATGTGAATGTTGGCTATGGAACTCTCGGTGGTTTGGGATTAGACGATGGTTGTGGTATAGAACTGATATATATGACGTCGTGTCCTACTGCGCAGAGCAACCAGTCTTGGTCCTGCATAGACATCCACAATATGCTTCTTTACGGCTTTGACCTTTATTGGCCCTATCTTTATTGGCACTATCTATTTGCAGCAGAAAGAAATACCATTCTTCAAAAGATCCTCCAGCTTATCGAGGACATTTGGTCATACCTCTACGCTATGATAACGTTCGACTACTTGGCGTGGAGGTTCACTCTATCATTGCCAGCTCTTTATACGGGGGCCAAATTTGTGTTGGGGGCTCCATTTTTCCTTGCCCTTCTGATCTATAAATGGCGACAAAGGCATTTATCTATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCCATAAGGTACTCCTATGGAAAAATCAAGAAGATGACAAAAGGATTTAAAGTAAGACTTGGGAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAGATGTTGGATAAGGCTAAAGCCAATGGGCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTAAATGTGGTGCAACTCATCGGTTATTGTGTGCAGGGATCAAAGCGTGCTCTTGTATACGAGTTCATGCAAAATGGTTCTCTTGACAAATACATTCTCTCTAAACCTAATGACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGGCAACTTCATCCCAAAGGTTTCTGATTTTGGCCTGGCTAAACTTTACCCAACAAATGATAGCATTGTGTCTCTTACGGCGGCAAGGGGAACTATAGGATACATGGCTCCTGAACTGTTCTACCAAAATGTAGGTGGAGTCTCCTATAAGGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCGAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGTGATCGTCCTTCAATGAACAGAGTTGTGGAGATGCTTGAAGGAGAGGAGCACGATTTAGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGCGAGGGATGATAATGCAAATTCAATACGGCGATCCAACTCATCAAGCAATCATCCTTCGATGGAAAAGGCTCTTGAAGCAGATAAGCAAGAGTCAGTATTGCCTCAGCAGTCTTTTCTATATGCACAAGATTCACCAACAATTGATGTTAGTGCTCATTCACGTTCAACGCCTAAATCCTCTGATCCTTCAGTGAATAATCCTAAAGAGACAACCTCATTTTTAGCTAAAGATGATGAGAGATCAATATAG 2139 0.4245 MTRDMCSLSTQFLVALFLIMLFCRTCKASDGGHQNCSHLCGHLNVSSPFRLNDSPEQCGYLRFNLSCEHNQLVMYWQSGRYSISSIDYENRTIRVRDANIVELDSSSPPEYSLTYYNFSNENEVVTRFRRYDGNMMMMFVKCEHPLHSPGFVDTAPCFNTSKGAAASSSSYSYVHVNVGYGTLGGLGLDDGCGIELIYMTSCPTAQSNQSWSCIDIHNMLLYGFDLYWPYLYWHYLFAAERNTILQKILQLIEDIWSYLYAMITFDYLAWRFTLSLPALYTGAKFVLGAPFFLALLIYKWRQRHLSMYESIEDFLQSDNNIIPIRYSYGKIKKMTKGFKVRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQDFINEVATLGRIHHVNVVQLIGYCVQGSKRALVYEFMQNGSLDKYILSKPNDNEQSLNLHQLYAISLGVARGIEYLHKGCDMQILHFDIKPHNILLDGNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVVEMLEGEEHDLELPQKPYLYPEELPARDDNANSIRRSNSSSNHPSMEKALEADKQESVLPQQSFLYAQDSPTIDVSAHSRSTPKSSDPSVNNPKETTSFLAKDDERSI 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00012 712 Gene3D Phosphorylase Kinase; domain 1 315 410 - -
Pral5319g00012 712 MobiDBLite consensus disorder prediction 626 712 - -
Pral5319g00012 712 FunFam PR5-like receptor kinase 411 619 - -
Pral5319g00012 712 ProSiteProfiles Protein kinase domain profile. 336 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00012 712 Pfam Protein tyrosine and serine/threonine kinase 340 608 IPR001245 GO:0004672|GO:0006468
Pral5319g00012 712 FunFam serine/threonine-protein kinase PBS1-like 306 410 - -
Pral5319g00012 712 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pral5319g00012 712 MobiDBLite consensus disorder prediction 660 701 - -
Pral5319g00012 712 Gene3D Transferase(Phosphotransferase) domain 1 411 620 - -
Pral5319g00012 712 SMART serkin_6 336 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00012 712 MobiDBLite consensus disorder prediction 635 650 - -
Pral5319g00012 712 SUPERFAMILY Protein kinase-like (PK-like) 318 611 IPR011009 -
Pral5319g00012 712 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
Pral5319g00012 712 PANTHER RUST RESISTANCE KINASE LR10-RELATED 308 637 IPR045874 GO:0004672
Pral5319g00012 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00012 Pral-Chr5319 91273 97700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00012 278 630 Receptor kinase-like Gene Family AT1G66910 47.581 8.53e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00012 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00012 - - pcin:129310315 915.22