Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00011 ATGACAAGGGACATGTGTTCCTTATCAACACAATTTCTGGTGGCTCTGTTTCTGATAATGTTATTCTGCAGAACTTGCAAGGCATCAGATGGTGGACACCAGAACTGTTCTCATTTGTGTGGACATCTTAATGTTAGCAGCCCTTTTCGGCTAAACGACTCTCCAGAGCAGTGTGGTTACCTCCGGTTTAACCTATCTTGCGAGCACAACCAACTGGTGATGTACTGGCAGTCTGGGAGATACAGTATTTCGTCCATTGATTATGAGAACCGCACAATTAGAGTGAGGGATGCTAATATTGTGGAGTTGGATTCCTCCTCCCCACCTGAGTATTCTTTAACATACTACAACTTCAGCAATGAAAATGAAGTTGTGACACGGTTTAGACGGTACGACGGCAATATGATGATGATGTTCGTGAAGTGTGAACACCCTCTGCATTCCCCTGGGTTTGTGGACACAGCCCCTTGCTTCAACACTTCAAAGGGGGCTGCAGCTTCTTCGTCTTCGTATTCGTATGTACATGTGAATGTTGGCTATGGAACTCTCGGTGGTTTGGGATTAGACGATGGTTGTGGTATAGAACTGATATATATGACGTCGTGTCCTACTGCGCAGAGCAACCAGTCTTGGTCCTGCATAGACATCCACAATATGCTTCTTTACGGCTTTGACCTTTATTGGCCCTATCTTTATTGGCACTATCTATTTGCAGAAAGAAATACCATTCTTCAAAAGATCCTCCAGCTTATCGAGGACATTTGGTCATACCTCTACGCTATGATAACGTTCGACTACTTGGCGTGGAGGTTCACTCTATCATTGCCAGCTCTTTATACGGGGGCCAAATTTGTGTTGGGGGCTCCATTTTTCCTTGCCCTTCTGATCTATAAATGGCGACAAAGGCATTTATCTATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCCATAAGGTACTCCTATGGAAAAATCAAGAAGATGACAAAAGGATTTAAAGTAAGACTTGGGAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAGATGTTGGATAAGGCTAAAGCCAATGGGCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTAAATGTGGTGCAACTCATCGGTTATTGTGTGCAGGGATCAAAGCGTGCTCTTGTATACGAGTTCATGCAAAATGGTTCTCTTGACAAATACATTCTCTCTAAACCTAATGACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGGCAACTTCATCCCAAAGGTTTCTGATTTTGGCCTGGCTAAACTTTACCCAACAAATGATAGCATTGTGTCTCTTACGGCGGCAAGGGGAACTATAGGATACATGGCTCCTGAACTGTTCTACCAAAATGTAGGTGGAGTCTCCTATAAGGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCGAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGTGATCGTCCTTCAATGAACAGAGTTGTGGAGATGCTTGAAGGAGAGGAGCACGATTTAGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGCGAGGGATGATAATGCAAATTCAATACGGCGATCCAACTCATCAAGCAATCATCCTTCGATGGAAAAGGCTCTTGAAGCAGATAAGCAAGAGTCAGTATTGCCTCAGCAGTCTTTTCTATATGCACAAGATTCACCAACAATTGATGTTAGTGCTCATTCACGTTCAACGCCTAAATCCTCTGATCCTTCAGTGAATAATCCTAAAGAGACAACCTCATTTTTAGCTAAAGATGATGAGAGATCAATATAG 2136 0.4242 MTRDMCSLSTQFLVALFLIMLFCRTCKASDGGHQNCSHLCGHLNVSSPFRLNDSPEQCGYLRFNLSCEHNQLVMYWQSGRYSISSIDYENRTIRVRDANIVELDSSSPPEYSLTYYNFSNENEVVTRFRRYDGNMMMMFVKCEHPLHSPGFVDTAPCFNTSKGAAASSSSYSYVHVNVGYGTLGGLGLDDGCGIELIYMTSCPTAQSNQSWSCIDIHNMLLYGFDLYWPYLYWHYLFAERNTILQKILQLIEDIWSYLYAMITFDYLAWRFTLSLPALYTGAKFVLGAPFFLALLIYKWRQRHLSMYESIEDFLQSDNNIIPIRYSYGKIKKMTKGFKVRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQDFINEVATLGRIHHVNVVQLIGYCVQGSKRALVYEFMQNGSLDKYILSKPNDNEQSLNLHQLYAISLGVARGIEYLHKGCDMQILHFDIKPHNILLDGNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVVEMLEGEEHDLELPQKPYLYPEELPARDDNANSIRRSNSSSNHPSMEKALEADKQESVLPQQSFLYAQDSPTIDVSAHSRSTPKSSDPSVNNPKETTSFLAKDDERSI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00011 711 MobiDBLite consensus disorder prediction 634 649 - -
Pral5319g00011 711 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pral5319g00011 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral5319g00011 711 Gene3D Phosphorylase Kinase; domain 1 314 409 - -
Pral5319g00011 711 MobiDBLite consensus disorder prediction 659 700 - -
Pral5319g00011 711 SMART serkin_6 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00011 711 MobiDBLite consensus disorder prediction 625 711 - -
Pral5319g00011 711 FunFam PR5-like receptor kinase 410 618 - -
Pral5319g00011 711 FunFam serine/threonine-protein kinase PBS1-like 305 409 - -
Pral5319g00011 711 Gene3D Transferase(Phosphotransferase) domain 1 410 619 - -
Pral5319g00011 711 Pfam Protein tyrosine and serine/threonine kinase 339 607 IPR001245 GO:0004672|GO:0006468
Pral5319g00011 711 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
Pral5319g00011 711 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00011 711 PANTHER RUST RESISTANCE KINASE LR10-RELATED 307 636 IPR045874 GO:0004672
Pral5319g00011 711 SUPERFAMILY Protein kinase-like (PK-like) 317 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00011 Pral-Chr5319 91273 97700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00011 277 629 Receptor kinase-like Gene Family AT1G66910 47.581 9.43e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00011 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00011 - - pcin:129310315 914.064