Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00010 ATGACAAGGGACATGTGTTCCTTATCAACACAATTTCTGGTGGCTCTGTTTCTGATAATGTTATTCTGCAGAACTTGCAAGGCATCAGATGGTGGACACCAGAACTGTTCTCATTTGTGTGGACATCTTAATGTTAGCAGCCCTTTTCGGCTAAACGACTCTCCAGAGCAGTGTGGTTACCTCCGGTTTAACCTATCTTGCGAGCACAACCAACTGGTGATGTACTGGCAGTCTGGGAGATACAGTATTTCGTCCATTGATTATGAGAACCGCACAATTAGAGTGAGGGATGCTAATATTGTGGAGTTGGATTCCTCCTCCCCACCTGAGTATTCTTTAACATACTACAACTTCAGCAATGAAAATGAAGTTGTGACACGGTTTAGACGGTACGACGGCAATATGATGATGATGTTCGTGAAGTGTGAACACCCTCTGCATTCCCCTGGGTTTGTGGACACAGCCCCTTGCTTCAACACTTCAAAGGGGGCTGCAGCTTCTTCGTCTTCGTATTCGTATGTACATGTGAATGTTGGCTATGGAACTCTCGGTGGTTTGGGATTAGACGATGGTTGTGGTATAGAACTGATATATATGACGTCGTGTCCTACTGCGCAGAGCAACCAGTCTTGGTCCTGCATAGACATCCACAATATGCTTCTTTACGGCTTTGACCTTTATTGGCCCTATCTTTTAGCAGCAGAAAGAAATACCATTCTTCAAAAGATCCTCCAGCTTATCGAGGACATTTGGTCATACCTCTACGCTATGATAACGTTCGACTACTTGGCGTGGAGGTTCACTCTATCATTGCCAGCTCTTTATACGGGGGCCAAATTTGTGTTGGGGGCTCCATTTTTCCTTGCCCTTCTGATCTATAAATGGCGACAAAGGCATTTATCTATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCCATAAGGTACTCCTATGGAAAAATCAAGAAGATGACAAAAGGATTTAAAGTAAGACTTGGGAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAGATGTTGGATAAGGCTAAAGCCAATGGGCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTAAATGTGGTGCAACTCATCGGTTATTGTGTGCAGGGATCAAAGCGTGCTCTTGTATACGAGTTCATGCAAAATGGTTCTCTTGACAAATACATTCTCTCTAAACCTAATGACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTTGATGGCAACTTCATCCCAAAGGTTTCTGATTTTGGCCTGGCTAAACTTTACCCAACAAATGATAGCATTGTGTCTCTTACGGCGGCAAGGGGAACTATAGGATACATGGCTCCTGAACTGTTCTACCAAAATGTAGGTGGAGTCTCCTATAAGGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCGAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGTGATCGTCCTTCAATGAACAGAGTTGTGGAGATGCTTGAAGGAGAGGAGCACGATTTAGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGCGAGGGATGATAATGCAAATTCAATACGGCGATCCAACTCATCAAGCAATCATCCTTCGATGGAAAAGGCTCTTGAAGCAGATAAGCAAGAGTCAGTATTGCCTCAGCAGTCTTTTCTATATGCACAAGATTCACCAACAATTGATGTTAGTGCTCATTCACGTTCAACGCCTAAATCCTCTGATCCTTCAGTGAATAATCCTAAAGAGACAACCTCATTTTTAGCTAAAGATGATGAGAGATCAATATAG 2124 0.4251 MTRDMCSLSTQFLVALFLIMLFCRTCKASDGGHQNCSHLCGHLNVSSPFRLNDSPEQCGYLRFNLSCEHNQLVMYWQSGRYSISSIDYENRTIRVRDANIVELDSSSPPEYSLTYYNFSNENEVVTRFRRYDGNMMMMFVKCEHPLHSPGFVDTAPCFNTSKGAAASSSSYSYVHVNVGYGTLGGLGLDDGCGIELIYMTSCPTAQSNQSWSCIDIHNMLLYGFDLYWPYLLAAERNTILQKILQLIEDIWSYLYAMITFDYLAWRFTLSLPALYTGAKFVLGAPFFLALLIYKWRQRHLSMYESIEDFLQSDNNIIPIRYSYGKIKKMTKGFKVRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQDFINEVATLGRIHHVNVVQLIGYCVQGSKRALVYEFMQNGSLDKYILSKPNDNEQSLNLHQLYAISLGVARGIEYLHKGCDMQILHFDIKPHNILLDGNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVVEMLEGEEHDLELPQKPYLYPEELPARDDNANSIRRSNSSSNHPSMEKALEADKQESVLPQQSFLYAQDSPTIDVSAHSRSTPKSSDPSVNNPKETTSFLAKDDERSI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00010 707 SUPERFAMILY Protein kinase-like (PK-like) 313 606 IPR011009 -
Pral5319g00010 707 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
Pral5319g00010 707 MobiDBLite consensus disorder prediction 655 696 - -
Pral5319g00010 707 FunFam serine/threonine-protein kinase PBS1-like 301 405 - -
Pral5319g00010 707 MobiDBLite consensus disorder prediction 621 707 - -
Pral5319g00010 707 Gene3D Phosphorylase Kinase; domain 1 310 405 - -
Pral5319g00010 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Pral5319g00010 707 ProSiteProfiles Protein kinase domain profile. 331 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00010 707 PANTHER RUST RESISTANCE KINASE LR10-RELATED 303 632 IPR045874 GO:0004672
Pral5319g00010 707 Pfam Protein tyrosine and serine/threonine kinase 335 603 IPR001245 GO:0004672|GO:0006468
Pral5319g00010 707 FunFam PR5-like receptor kinase 406 614 - -
Pral5319g00010 707 MobiDBLite consensus disorder prediction 630 645 - -
Pral5319g00010 707 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Pral5319g00010 707 SMART serkin_6 331 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00010 707 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00010 Pral-Chr5319 91273 97700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00010 273 625 Receptor kinase-like Gene Family AT1G66910 47.581 6.59e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00010 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00010 - - pcin:129310315 913.679