Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00009 ATGTATACGGGAGGTAAATTTGTGCTGGGGGCTCCATTTGTCATTGCCCTTTTGATCTATAAATGGCGACGAAGGCATTTATCAGTGTATGAAAGCATTGAAGATTTTCTGCAAAATGACAACAACATCATCCCTATAAGGTACTCCTACAATGACATCAAGAAGATGACAAAAGGATTTAAAATAAGACTTGGAAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGACGTGGCTGTCAAGATGTTGGATAAGGCTAAAGCCAATGGTCAGGATTTCATCAACGAGGTTGCAACACTTGGTAGAATCCACCATGTTAATGTGGTGCAACTCGTCGGTTATTGTGTGGAAGGATCAAAGCACGCTCTTGTATATGACTTCATGCAAAATGGGTCTCTTGACAAATACATTCTCTCTAAACCTAATGACAATGAGCAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTTGGAGTAGCTCGTGGTATTGAATATCTGCATAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTCCTTGATGGCAACTTCATCCCAAAGGTTTCTGATTTTGGCCTTGCTAAACTTTACCCAACAAATGATAGCATTGTGTCTCTTACGGCAGCAAGGGGAACTATAGGATACATGGCTCCTGAACTGTTCTACCAAAATGTAGGTGGAGTCTCCTATAAGGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGCAATCGAGTCAATTTTATTTTCCTTTTGGGCTTATGATCAGTTAA 849 0.4052 MYTGGKFVLGAPFVIALLIYKWRRRHLSVYESIEDFLQNDNNIIPIRYSYNDIKKMTKGFKIRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQDFINEVATLGRIHHVNVVQLVGYCVEGSKHALVYDFMQNGSLDKYILSKPNDNEQSLNLHQLYAISLGVARGIEYLHKGCDMQILHFDIKPHNILLDGNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFGLMIS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00009 282 FunFam Os07g0541700 protein 133 224 - -
Pral5319g00009 282 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 276 IPR045874 GO:0004672
Pral5319g00009 282 Gene3D Transferase(Phosphotransferase) domain 1 133 275 - -
Pral5319g00009 282 FunFam serine/threonine-protein kinase PBS1-like 28 132 - -
Pral5319g00009 282 ProSiteProfiles Protein kinase domain profile. 58 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00009 282 Gene3D Phosphorylase Kinase; domain 1 35 132 - -
Pral5319g00009 282 SMART serkin_6 58 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00009 282 SUPERFAMILY Protein kinase-like (PK-like) 41 264 IPR011009 -
Pral5319g00009 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pral5319g00009 282 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Pral5319g00009 282 Pfam Protein tyrosine and serine/threonine kinase 62 257 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00009 Pral-Chr5319 86444 87582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00009 8 276 Receptor kinase-like Gene Family AT4G18250 48.375 4.90e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00009 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00009 - - pcin:129310315 501.516