Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00007 ATGAACATTGTAAATCAAACTGTTCTTGAGCTCCCTGGGTCAGTCAAGTTCAATGTCAAACACATCGATTACAAAAACCAAATCATTCAATTATATGATCTTTCTGGCTGTCTCTTGAGGCATGTCCGTAACCTCAATCTGTACCCTTCCCCCTTCCAATTCATATCCCCACAAAACTACACCCTTTTCAATTACTCATCCCCAAGACATGGAGAATTCTTTTCAACGTGCCTCGACAGCTCTACTTATCAAGTATATGCTGTTTCTTCTAGCGCCTATATCGATGACCTAATTCCCCTGTTTTCTTGCAGCAAAATATTTGACATTTCATCTGTCCCACCTGAGATTTTTGATGTTGAGAACACACTTCATTTGATGTGGTCTCATCCAAGGTGCCAATATTGTGAATCAAATCGAACGAGATGTGGATTCAACAAGAGGAATAGTAGTGATATTGCATGTTTCGAGGTTCTTTACAAAGACTCATCAAACAAATTTGTAATTCCAGGATCAATCTTGGGCTCACTTCTTCTAGTGGTGACAACGGTTGTAATTCATTATGCTCGCAACTCCTACAAATCACGGAAAGAAAGCCAAGCAATAATTGAAAAGTTTCTGAAAGATTATAGAGCTTGCAAGCCAACCAGATATTCTTATGCTGAAATCAAGAGGATTACCAATCAATTTGATGTCAAGTTAGGGGAAGGATCTTTCGGCACTGTGTTCAAAGGAAGCATTTCATCTGAGTTCAAAGTTGCAGTGAAGATCCTCACTAATTCTGAAGGAAATGGTGAAGAGTTCATTACTGAAGTTGGAACAATGGGCAAAATTCATCATGTCAACGTTATTCGTTTAATGGGCTTTTGTGCAGATGGCTTTAGAAGAGCCCTAGTTTACGAATACTTTCCAAACGGTTCATTACAAAATTTCATAAATTCACCAGATAACAGGCAAAACTTTATTGGTTGGAAAAAGCTCCATGGTATTGCTTTAGGTATAGCCAAAGGTATTGAGTATCTTCATCAAGGGTGTGAACAACGCATACTTCATTTTGATATCAAACCTTACAATATTTTATTGGATGCTAATTTCACTCCAAAAATTTGTGATTTTGGGCAGGCCAAATTGTGCTCTAAAGATCAAAGCATAGTGTCAATGACTAATGCTAGAGGAACTTTAGGTTACATTGCTCCAGAAGTCTTCTCTCGAAATTTTGGAAATGTATCTCATAAAGCAGATGTTTATAGTTTCGGGATGTTGCTACTTGAAGTAATAGGGGGAAGAAGCATCACCCATGACACGAAAGAAAATGCGACCCATATTTACTATCCCGAATGGATCTATAGTATTTTAGAAGAAAGGGAGGATGTAAGGATTCATATTGAGGAAGAAGGAGATGGTAAAATTGCAAGAATGTTGGGAATAGTGGGATTGTGGTGCATTCAGTGGCATCCTGTAGATCGACCATCAATGCAAGCAGTGGTTCAAATGTTAGAAGGAGAAGAAGACAAATTACCAATCCCTCCGAATCCTTTTAATTCTGAAGGTACATCAACCAGAAAAAGGGCCAGCGTGCCTACAAGAAGTCTGATGCAAGGTTTAGAAATAATCCAAGAAGTAGAGTGA 1626 0.3844 MNIVNQTVLELPGSVKFNVKHIDYKNQIIQLYDLSGCLLRHVRNLNLYPSPFQFISPQNYTLFNYSSPRHGEFFSTCLDSSTYQVYAVSSSAYIDDLIPLFSCSKIFDISSVPPEIFDVENTLHLMWSHPRCQYCESNRTRCGFNKRNSSDIACFEVLYKDSSNKFVIPGSILGSLLLVVTTVVIHYARNSYKSRKESQAIIEKFLKDYRACKPTRYSYAEIKRITNQFDVKLGEGSFGTVFKGSISSEFKVAVKILTNSEGNGEEFITEVGTMGKIHHVNVIRLMGFCADGFRRALVYEYFPNGSLQNFINSPDNRQNFIGWKKLHGIALGIAKGIEYLHQGCEQRILHFDIKPYNILLDANFTPKICDFGQAKLCSKDQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLEVIGGRSITHDTKENATHIYYPEWIYSILEEREDVRIHIEEEGDGKIARMLGIVGLWCIQWHPVDRPSMQAVVQMLEGEEDKLPIPPNPFNSEGTSTRKRASVPTRSLMQGLEIIQEVE 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00007 541 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Pral5319g00007 541 Gene3D Phosphorylase Kinase; domain 1 201 301 - -
Pral5319g00007 541 MobiDBLite consensus disorder prediction 511 525 - -
Pral5319g00007 541 ProSiteProfiles Protein kinase domain profile. 227 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00007 541 FunFam serine/threonine-protein kinase PBS1-like 194 301 - -
Pral5319g00007 541 FunFam PR5-like receptor kinase 302 509 - -
Pral5319g00007 541 SMART serkin_6 227 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00007 541 Pfam Protein kinase domain 230 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00007 541 SUPERFAMILY Protein kinase-like (PK-like) 212 499 IPR011009 -
Pral5319g00007 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Pral5319g00007 541 MobiDBLite consensus disorder prediction 505 525 - -
Pral5319g00007 541 Gene3D Transferase(Phosphotransferase) domain 1 302 505 - -
Pral5319g00007 541 PANTHER RUST RESISTANCE KINASE LR10-RELATED 198 517 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00007 Pral-Chr5319 68563 98326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00007 132 511 Receptor kinase-like Gene Family AT1G66910 43.641 2.46e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00007 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00007 - - qsa:O6P43_019907 635.18