Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00006 ATGAAAATTCTTTCTGATTCTGAAATAGGAAATGGTGAAGACTTCATCAGGGAAGTTGGAACTATGGCCAAAATCCATCATGTCAACATTATTCGCTTAGTCGGCTTCTGTGCTGATGGCTTTAGAAGAGCGCTTGTTTATGAGTACTTACCAAATGATTCATTACAAAATTTCATAAATTCACTTGGCCAAAGGAAAAACTTTCCTGGTTGGAAAAAGTTACAGGAAATTGGTTTAGGCATAGCCAAAGGAATTGAGTATCTTCATCATGGTTGTGAGAAGCGCATGCTTCATTTTGACATAAAACCTCAAAATGTTTTATTAGATAGTGATTTCACTCCAAAAATATCTGATTTTGGGCTAGCCAAATTATGTTCTAAAAATCAAAGTATAGTGTCAATAACTAATGCCAGAGGTACTTTTGGTCATATAGCTCCTAAAGTATTCTCTCAAAACTTTGGAAATGTGTCTCACAAAGCGAATGTTTATAGTTTTGGGATGCTTCTACTTGAAGTGATAGCGGGGAGAATGATCACCAATGATGCAGAAGAAAATGCAGCCCACATCTAA 570 0.3596 MKILSDSEIGNGEDFIREVGTMAKIHHVNIIRLVGFCADGFRRALVYEYLPNDSLQNFINSLGQRKNFPGWKKLQEIGLGIAKGIEYLHHGCEKRMLHFDIKPQNVLLDSDFTPKISDFGLAKLCSKNQSIVSITNARGTFGHIAPKVFSQNFGNVSHKANVYSFGMLLLEVIAGRMITNDAEENAAHI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00006 189 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 179 IPR045874 GO:0004672
Pral5319g00006 189 SUPERFAMILY Protein kinase-like (PK-like) 2 182 IPR011009 -
Pral5319g00006 189 Pfam Protein kinase domain 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00006 189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Pral5319g00006 189 SMART serkin_6 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00006 189 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Pral5319g00006 189 FunFam Os07g0541700 protein 50 140 - -
Pral5319g00006 189 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00006 Pral-Chr5319 39872 40441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00006 1 176 Receptor kinase-like Gene Family AT1G66910 55.114 1.24e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00006 Pkinase 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00006 - - aprc:113873873 291.197