Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5319g00005 ATGTATGAAAGCATTGAAGATTTTCTGCAAAGCGACAACAACATCATCCCCATAAGGTACTCCTATAGAAAAATCAAGAAGATGACAAAAGGGTTTAAAGTAAGACTTGGAAAAGGAGGCTATGGCTCTGTGTTCAAAGGACAACTTCGAAGTGGTCGTGATGTGGCTGTCAAAATGTTGGATAAGGCTAAAGCCAATGGTCAGGAGTTCATCAACGAAGTTGCTACACTTGGTAGAATCCACCATGTTAATGTGGTGCAACTTGTCGGTTACTGTGTGGAGGGATCAAAGCGTGCTCTTGTATACGAGTTCATGCAAAATGGGTCTCTTGACAAATACATTCTTTCTAAACCTAATGACAATGAGAAATCCTTGAATCTTCATCAATTGTATGCCATTTCTCTAGGAGTAGCTCCTGGTATTGAATATCTTCACAAGGGGTGTGATATGCAAATTCTACATTTTGATCCAAAGCCGCACAACATTCTTCTTGATGACAATTTCATCCCAAAGGTTTCTGATTTTGGCCTTGCTAAACTTTACCCAACAAATGATAGCATTGTGTCTCTTACAGCGGCAAGGGGAACTATAGGATACATGGCTCCTGAGCTCTTCTACAAAAATGTACGTGGGGTCTCCTATAACGCTGATGTGTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGTAGAAGGAAGAATCTGAATGTGTTGGCTGAGGAATCGAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAGTTAAATGAAGGGAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGCTGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTAGTGATCGTCCTTCAATGAACAGAGTTGTGGAGATGCTTGAAGGAGATGAGCACGATTTAGAATTGCCTCAAAAGCCTTATCTATATCCAGAAGAGTTACCAGCAAGGGATGACAATGCAAATTCAATACGGCGATCCAACTCATCAAGCAATCATCCTTCGATGGAAAAGGCTCTTGAAGCAGAGGAGCAAGAGTCAGTATTGCCTCAGCAGTCTTTTCTATATGCACAAGATTCACCAACAATTGATGTTAGTGCTCATTTACGTTCAACGCCTAAATCCTCTGATCCTTCAGTGAATAATCCTAAAGAGACAACCTCATTTTTAGCTAAAGATGATGAGAGATCAATATAG 1221 0.4038 MYESIEDFLQSDNNIIPIRYSYRKIKKMTKGFKVRLGKGGYGSVFKGQLRSGRDVAVKMLDKAKANGQEFINEVATLGRIHHVNVVQLVGYCVEGSKRALVYEFMQNGSLDKYILSKPNDNEKSLNLHQLYAISLGVAPGIEYLHKGCDMQILHFDPKPHNILLDDNFIPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYKNVRGVSYNADVYSFGMLLMEMAGRRKNLNVLAEESSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMLIVGLWCIQTKPSDRPSMNRVVEMLEGDEHDLELPQKPYLYPEELPARDDNANSIRRSNSSSNHPSMEKALEAEEQESVLPQQSFLYAQDSPTIDVSAHLRSTPKSSDPSVNNPKETTSFLAKDDERSI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5319g00005 406 FunFam PR5-like receptor kinase 105 313 - -
Pral5319g00005 406 MobiDBLite consensus disorder prediction 354 395 - -
Pral5319g00005 406 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Pral5319g00005 406 MobiDBLite consensus disorder prediction 320 406 - -
Pral5319g00005 406 ProSiteProfiles Protein kinase domain profile. 30 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5319g00005 406 Pfam Protein tyrosine and serine/threonine kinase 34 302 IPR001245 GO:0004672|GO:0006468
Pral5319g00005 406 SUPERFAMILY Protein kinase-like (PK-like) 11 305 IPR011009 -
Pral5319g00005 406 FunFam serine/threonine-protein kinase PBS1-like 3 104 - -
Pral5319g00005 406 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Pral5319g00005 406 Gene3D Transferase(Phosphotransferase) domain 1 105 314 - -
Pral5319g00005 406 MobiDBLite consensus disorder prediction 329 344 - -
Pral5319g00005 406 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 327 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5319g00005 Pral-Chr5319 32812 35266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5319g00005 15 324 Receptor kinase-like Gene Family AT1G66910 50.316 2.50e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5319g00005 PK_Tyr_Ser-Thr 8.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5319g00005 - - pcin:129310315 639.417