Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5318g00006 ATGAAGTTCTATTCATCTTCGTTGCAACCTTTCCTTTTGGTCATTGTTATTATTTTTCCTCTGGCTATTGCTGACTTAAATTCGGAAAAGCAAGCCCTTCTTAGTTTTGCCAATGCTATCCCCCATCAGCGGAACCTTAAGTGGGATCCATCCAGCTCTGTCTGCAAGTCTTGGGTCGGCATCACTTGCAATCCAAATGGCACTCACGTTGTTTCTGTCAGGCTCCCTGGAATTGGACTCGTGGGATCCATCCCAACTAATACACTTGGAAAGCTTGACAGCCTTAGAACTATAAGCCTTCGATCCAACCTACTCACTGGAAATTTACCTAGTGATATCACTTCTCTTCCTTCTCTCCAGTATCTCTACCTCCAGCATAATAACCTTTCAGGTGATATACCCACCTCATTTTCACCCCAACTAAATGTACTTGATCTGTCTGATAATTCTTTCACCGGTGTAATTCCAGAGACTTTACAAAATTTAACAGAACTGACTAGATTATACCTTCAGAACAACTCCCTTTCTGGACGGATACCTAATCTCAAAGTCCCTAAGCTCAAGCTTTTGAACTTAAGTTACAACCAGTTGAATGGCTCTATCCCACCAGCTCTTCAGAAATTTCCCAACTCATCCTTTGAAGGGAATTCTCTCTTGTGTGGAAAACCTCTAAAACCCTGCACTTCTGTCCCTCCTACACCTTCTCCTGCCTTACCTCCAGCCCCACCATTGGCTCCAAAAAGGCAAAGCTCCAAAAATAAATTGAGTAAGGTAGCTATCATTGCAATCGCTGTTGGAGGAGCTGTTCTGCTGTTACTTATAGCTCTTGTTATTGTTCTCTGCTGTTTAAAGAAAAAAGACAATGGAAGATCCAGTGTAATTAAAGGGAAGGGTCCTAGTGGTGGGAGAGGAGAGAAGCCGAAAGAAGAGTTTGGCAGTGGCGTGCAAGAACCCGAGAAGAACAAGTTGGTTTTCTTTGAAGGCTGTTCTTATAATTTTGATCTTGAGGATTTGCTAAGAGCTTCAGCTGAAGTTCTGGGTAAGGGTAGCTATGGTACTGCCTATAAGGCTGTATTGGAGGAGTCCACTACTGTTGTGGTGAAAAGGTTGAAGGAAGTAGTGGTGGGCAAGAGAGACTTTGAACAGCAGATGGAGACTGTGGGAAGGGTTGGGCAGCATCCAAATGTTGTACCCCTTCGTGCTTATTATTATTCAAAGGATGAGAAACTTTTGGTCTATGACTATATCTCAGGGGGCAACCTGTCAACACTACTGCATGGTAGTAGGTCAGGTGGAAGAGCTCCGTTAGATTGGGATTCCCGAGTGAAGGTCTCCCTGGGAGCTGCCCGAGGAGTTGCCCACATACATTCCGTTGGGGGTCCAAAATTCACTCATGGAAATATCAAGTCCTCAAATGTCCTCATCCAAGATAATGAAGCCTGCATTTCTGATTTTGGCTTGACCCCGCTTATGAATGTTCCAGCAGCCCCCTCCAGGGCTGCAGGTTATCGCGCTCCTGAGGTGATTGAGATGCGTAAACACACTCATAAATCAGATGTGTACAGCTTCGGTGTCCTCCTTCTGGAAATGCTTACTGGGAAAGCACCCCTCCAGTCACCGGGACGTGATGATATGGTTGATCTCCCTAGATGGGTCCACTCTGTTGTTAGGGAGGAATGGACGGCTGAGGTTTTTGATGTGGAGCTAATGAGGTATCAAAACATTGAAGAAGAAATGGTTCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTGCCGGATATGCGACCTAGCATGGATGATGTAGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCGTCTTCGGAAGAGAATAAATCCAAGGACTCCAACGTTCAAACTCCATAA 1905 0.452 MKFYSSSLQPFLLVIVIIFPLAIADLNSEKQALLSFANAIPHQRNLKWDPSSSVCKSWVGITCNPNGTHVVSVRLPGIGLVGSIPTNTLGKLDSLRTISLRSNLLTGNLPSDITSLPSLQYLYLQHNNLSGDIPTSFSPQLNVLDLSDNSFTGVIPETLQNLTELTRLYLQNNSLSGRIPNLKVPKLKLLNLSYNQLNGSIPPALQKFPNSSFEGNSLLCGKPLKPCTSVPPTPSPALPPAPPLAPKRQSSKNKLSKVAIIAIAVGGAVLLLLIALVIVLCCLKKKDNGRSSVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYISGGNLSTLLHGSRSGGRAPLDWDSRVKVSLGAARGVAHIHSVGGPKFTHGNIKSSNVLIQDNEACISDFGLTPLMNVPAAPSRAAGYRAPEVIEMRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMDDVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5318g00006 634 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Pral5318g00006 634 Gene3D Ribonuclease Inhibitor 184 228 IPR032675 -
Pral5318g00006 634 MobiDBLite consensus disorder prediction 292 315 - -
Pral5318g00006 634 Pfam Leucine rich repeat 127 175 IPR001611 GO:0005515
Pral5318g00006 634 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Pral5318g00006 634 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pral5318g00006 634 Gene3D Transferase(Phosphotransferase) domain 1 416 633 - -
Pral5318g00006 634 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Pral5318g00006 634 MobiDBLite consensus disorder prediction 229 249 - -
Pral5318g00006 634 SUPERFAMILY L domain-like 29 227 - -
Pral5318g00006 634 PANTHER OS05G0588300 PROTEIN 12 622 - -
Pral5318g00006 634 CDD STKc_IRAK 346 610 - -
Pral5318g00006 634 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Pral5318g00006 634 ProSiteProfiles Protein kinase domain profile. 340 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5318g00006 634 MobiDBLite consensus disorder prediction 609 634 - -
Pral5318g00006 634 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5318g00006 634 MobiDBLite consensus disorder prediction 301 315 - -
Pral5318g00006 634 ProSitePatterns Protein kinases ATP-binding region signature. 346 377 IPR017441 GO:0005524
Pral5318g00006 634 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Pral5318g00006 634 MobiDBLite consensus disorder prediction 229 246 - -
Pral5318g00006 634 FunFam pollen receptor-like kinase 1 308 415 - -
Pral5318g00006 634 MobiDBLite consensus disorder prediction 609 625 - -
Pral5318g00006 634 SUPERFAMILY Protein kinase-like (PK-like) 344 617 IPR011009 -
Pral5318g00006 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5318g00006 Pral-Chr5318 32844 37012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5318g00006 3 632 Receptor kinase-like Gene Family AT5G58300 70.330 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5318g00006 Pkinase 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5318g00006 - - gmx:100796171 1006.51