Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5311g00038 ATGGTTGAGTTCCCGTCTATTCCTGCTCTCAAACGAGAAACCTTCGCCGTCAATAACATATACAACGAATCCCACTTCCTACACATGTCCTTACGTGATCCAAAACGTTGTCTTCCCAGACTCTTTCTAGAACGTCGTCTCTACAATTCATCCAATATTGGTCCTTTGGAGTATGATAATTTTAATGTGACCGAAAATGTTACTTTCTTCAATTGTTCTTCAATTGGTTCGAGACGCCTCAGAAACATAAATATGGAACAAGATATGATTGTCTGCCCCATTTTTGCTGCTTCCTCCGAAGATAGTGTCCTGGAGTGGGACCTAGCTTCTTGCACTATGATGTTTCAGCTAGCTTCGCCAATACGAGCAGATCAGCTTCGGGCGAACTACTTGCCACTCAGGTTGCCTCAGACAAAATCTGACATTGAAAAGCACAAAACTAGCATGATTCTTATAATTGTTTTACCAGGGTCATTTGTACTGGTGGTGTTGTTCATTGTAAGCCTTTACATATATCGCCACTTCAAGAAGAGGGGGGAAGATCAAGTAAGATTGGAAAAGTTTTTGGAAGATTACAAGGCAATGAAGCCTACTAGATTCTCTTATGCTGATCTCAAAAGAATTACAAACCATTTCAAGGGTAAAGTAGGTGAAGGAGCTCATGGAACTGTCTTTAAAGGTAAGCTATCTTCTGAAATTCAAGTGGCTGTAAAAGTACTTAATAATGCAGAAAACGATGGACAAGACTTCATTAATGAAATTGGGACTATGGGCAAAATCCATCACATCAATATTGTTCGTTTGCTAGGCTTTTGTGCTTATGGTTTTCACCGTGCTCTTGTATATGAGTTTTTCCCTAACGGTTCACTTCAGAAGTTCATATCTTCCCCTGACGACAAAGAAAATTTCATTGGATGGCTAAAGTTACAACAACTAGCCCTTGGCATAGCAAGAGGGATTGAGTACCTTCACCAAGGTTGTGATTATCGAATTCTTCACTTTGACATCAATCCTCATAATGTGTTATTAGATCATAATTTCATTCCTAAAATTTCTGATTTTGGTTTAGCCAAATTATGTTCTAAAAATCAAAGTACAGTGTCAATGACGGCAGCTAGAGGAACTTTAGGTTATATTGCACCTGAAGTTTACTCTCGAAACTTTGGGAATGTATCATATAAATCAGACGTTTATAGTTATGGAATGTTACTGCTAGAGATGGTTGGAGGAAGAAAAAATGTTGACACAAATCAAGACACTTTTCAAGTTCTGTACCCAGAATGGATTCATAATTTGATTGAAGGAGGAGATATAAATATCTATTTGGAGGAAGATGATGATATTAGAATTGCAAAGAAACTAGCAATTGTAGGGCTTTGGTGTATTCAGTGGCATCCAATAAACCGGCCATCCATGAAAATGGTGATACAGATGTTAGAAGGAGAAGTAGATAAATTAAAGGTGCCTCCTACTCCATTTGACACTGCTACTTCAATCATTACAAGAACCATTATTCCTGCAAGACATCTGAAATCTGAGTTGGAAGCGATTCATGAATTAGAATGA 1566 0.3806 MVEFPSIPALKRETFAVNNIYNESHFLHMSLRDPKRCLPRLFLERRLYNSSNIGPLEYDNFNVTENVTFFNCSSIGSRRLRNINMEQDMIVCPIFAASSEDSVLEWDLASCTMMFQLASPIRADQLRANYLPLRLPQTKSDIEKHKTSMILIIVLPGSFVLVVLFIVSLYIYRHFKKRGEDQVRLEKFLEDYKAMKPTRFSYADLKRITNHFKGKVGEGAHGTVFKGKLSSEIQVAVKVLNNAENDGQDFINEIGTMGKIHHINIVRLLGFCAYGFHRALVYEFFPNGSLQKFISSPDDKENFIGWLKLQQLALGIARGIEYLHQGCDYRILHFDINPHNVLLDHNFIPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVYSRNFGNVSYKSDVYSYGMLLLEMVGGRKNVDTNQDTFQVLYPEWIHNLIEGGDINIYLEEDDDIRIAKKLAIVGLWCIQWHPINRPSMKMVIQMLEGEVDKLKVPPTPFDTATSIITRTIIPARHLKSELEAIHELE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5311g00038 521 Gene3D Transferase(Phosphotransferase) domain 1 285 489 - -
Pral5311g00038 521 ProSiteProfiles Protein kinase domain profile. 210 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00038 521 Gene3D Phosphorylase Kinase; domain 1 184 284 - -
Pral5311g00038 521 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Pral5311g00038 521 FunFam PR5-like receptor kinase 285 490 - -
Pral5311g00038 521 Pfam Protein kinase domain 212 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00038 521 SUPERFAMILY Protein kinase-like (PK-like) 193 480 IPR011009 -
Pral5311g00038 521 FunFam serine/threonine-protein kinase PBS1-like 178 284 - -
Pral5311g00038 521 PANTHER RUST RESISTANCE KINASE LR10-RELATED 182 496 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5311g00038 Pral-Chr5311 322372 324299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5311g00038 160 520 Receptor kinase-like Gene Family AT1G66910 45.553 6.79e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5311g00038 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5311g00038 - - tpra:123893290 620.157