Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5311g00036 ATGGGTAGAGGGATAATAGGCTTAATCAGGTTCTGGGGCTTGATGTACTTCACTCTTGTGTATGTGACATCGCAAACAACGAGTTTTAAAGATGAGAGCAAAACCTGTAATCCGTCTCATTGCGGCATTATCACAAACATCTCATATCCATTTCGTCTGCGAGACGACAACTGTGGCGATCCGGCATACGAGTTAGCCTGTGAAAACAACATCACACTGCTTGATTTGCATTCAGGAACATACCAGGTTCTGGGAATCAACTACAAAAATTACACAATCCGAGTTAAAGATCCTGGCATTCGGGAGGGTGATTGCTCCTCCCTCCCTCGCTATTTCTTATCCCGATCTAATTTCAGCGACACTTATAATGGTTCCTTCGAATATGATAGGAATAATCCCTATGCTGTCTTTCTAGAAGCATCCGCAGGTTCAGAAGCTACAATCGACAACGTCATTTACCTGGATTGTAGTGATCCGGTGAGGGACGATGCGGACTACGTGGATACGGCTCCCTGCGTGGATTGGGGATCCAAAGGAGATGGAGGAGGCCATGTTTATGCTGTAGTTGGAGACTTAGAGGCTGGGAGGTTGAAACCTGAGTGTCGTGTGAAATCAGTGGCCACCATTGTTTCAGATTGGAGTTCATTCCTGGACTGGAGAAGCTACTCATACGCTGATATTCACACAGTACTTTCCCATGGTTTTGAGATTTCATCGTGGCCGCTAGCTTGTCTGGATATTCACTGCGGAACTTACGAGACTTGCGTCCTCGACGATCGCACGCAAAAGGTCTCTACCTATTGGTGGTGGGATGCCACCTGGTTTGTTGGTATATTATTTCTGTTCATCTTGTTGATTTACACATGGCGGAGAAGACACTTATCAGGCTATGGAAGCATTGAGGATTTCATACGACTTCATAGCCTTCATCCATTAAGGTACTCCTACAAGGATTTAAAGACTATGACAAACGGTTTCAAGACTAAGTTAGGTGAAGGAGGCTTTGGGACTGTGTACAAAGGCAAGTTAAGAAGTGGACCTGATGTCGCAATTAAAATGTTGGGTGATAAATCCAAAGCTACTTGCCAAGACTTTATCAATGAGGTGGCAACTTTAGGAAGGATACACCGTTTCAATGTGGTGCGTCTTGTTGGCTTTTGCGTGGAAGGAACTAAACATGCTCTTATTTATGAATCCATGTCCAATGGATCTTTGGATAAACATATTTTTGTTAAAGAAGGACAATCCTCCTTGAATTATCATAAGATATATGAGATATCTTTAGGAGTGGCCCGTGGCATTGCTTATCTTCATCATGGTAGTGACATGCAAATCTTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATGACAACTTGACCCCCAAAATTTCAGACTTTGGACTAGCAAAGCTATATTCTAGTGATAATAGCATTGCCACTTTGACTGCAGCAAGAGGGACAATAGGGTACCTAGCTCCTGAACTATTCTATAAGAATATTGGAAAAGTATCCTATAAATCTGATGTTTACAGTTTTGGAATGCTTTTAATGGAAATGACGAGCCGAAGAAGAAACTTGAATCCGCATGCAGAGCATTCAAGCCAATTATATTTTCCCCTATGGATCTATGACCAATTTGATGAAGAAAAAGATATAGAAATGGAGGATTTGATAGAAGAGGACAAAGCTTTAGCAAAGAAAATGTTCATAGTGGCATTATGGTGCATTCAGTTTAATCCTGTTGATCGTCCTTCAATGAACAAAGTAATAGAGATGTTAGAAGTAGATGATGTTCAAAGTCTTGAGATGCCTCCAAAACCTTCTATATATCCTGATGGTAATGTTAGAGCCAACTGTGACCAAACATCATCTTTACCCACAAGTTCTGATGGCAATCTAGGAGAGGATGCAAGTGACGAGACATAA 1932 0.4156 MGRGIIGLIRFWGLMYFTLVYVTSQTTSFKDESKTCNPSHCGIITNISYPFRLRDDNCGDPAYELACENNITLLDLHSGTYQVLGINYKNYTIRVKDPGIREGDCSSLPRYFLSRSNFSDTYNGSFEYDRNNPYAVFLEASAGSEATIDNVIYLDCSDPVRDDADYVDTAPCVDWGSKGDGGGHVYAVVGDLEAGRLKPECRVKSVATIVSDWSSFLDWRSYSYADIHTVLSHGFEISSWPLACLDIHCGTYETCVLDDRTQKVSTYWWWDATWFVGILFLFILLIYTWRRRHLSGYGSIEDFIRLHSLHPLRYSYKDLKTMTNGFKTKLGEGGFGTVYKGKLRSGPDVAIKMLGDKSKATCQDFINEVATLGRIHRFNVVRLVGFCVEGTKHALIYESMSNGSLDKHIFVKEGQSSLNYHKIYEISLGVARGIAYLHHGSDMQILHFDIKPHNILLDDNLTPKISDFGLAKLYSSDNSIATLTAARGTIGYLAPELFYKNIGKVSYKSDVYSFGMLLMEMTSRRRNLNPHAEHSSQLYFPLWIYDQFDEEKDIEMEDLIEEDKALAKKMFIVALWCIQFNPVDRPSMNKVIEMLEVDDVQSLEMPPKPSIYPDGNVRANCDQTSSLPTSSDGNLGEDASDET 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5311g00036 643 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
Pral5311g00036 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Pral5311g00036 643 SMART serkin_6 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00036 643 SUPERFAMILY Protein kinase-like (PK-like) 307 597 IPR011009 -
Pral5311g00036 643 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Pral5311g00036 643 ProSiteProfiles Protein kinase domain profile. 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00036 643 MobiDBLite consensus disorder prediction 604 643 - -
Pral5311g00036 643 Gene3D Phosphorylase Kinase; domain 1 300 398 - -
Pral5311g00036 643 FunFam PR5-like receptor kinase 400 607 - -
Pral5311g00036 643 Gene3D Transferase(Phosphotransferase) domain 1 400 605 - -
Pral5311g00036 643 MobiDBLite consensus disorder prediction 617 636 - -
Pral5311g00036 643 FunFam serine/threonine-protein kinase PBS1-like 299 399 - -
Pral5311g00036 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 299 616 IPR045874 GO:0004672
Pral5311g00036 643 Pfam Protein kinase domain 327 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5311g00036 Pral-Chr5311 285218 289858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5311g00036 19 612 Receptor kinase-like Gene Family AT5G38260 35.474 2.53e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5311g00036 Pkinase 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5311g00036 - - gmx:100305358 653.669