Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5311g00035 ATGGTTTGCTGTCAGAGAGCTTTGTGGTTGGTGATAATGCAGGTGTTGGTGCTGCTTATGAATCTGGGGAATGCTCAGAACCAGTGTGTCCCTGACGATGAAAGTGTTCCGTTCCGTCTAGTACAGGCCACACTTGATAGTAATCCCTGTTCTACTACAACTAACAATGTGGAGATGGTTGAGTTCCCCGGAGTACTGGCTCTTCAAGGAGTTAGACTCGCCGTCTTAGAAAAACACTATGAGTCCCGCATCTTAAAATTATGTGATGTTGAAGGTTGTCTTCCTAAACTCTTTCTACGACTTCATCGTTCATCCATTTATCCTTTCCAATTTGAAACAGTTAGGTCGGCATCATCCAACAAAAGTTTCGGTGTTACATTTTTCGATTGTTCCTCGATTGGGTCGGAATACTTGAAAAACGACGATTACTCGTTCCAAGCAAATTTGCGTGTTTGTCCCATTTATGTTGTTGGCTCCACCGAAGGTATCCTTGAGAGGGACGTGACCTCTTGCACCAAGATGTTGCACTTAGATTCGCCATTAGACCAAGATGATTTTCTGTTCAACAATTTTAACTTTAGATGGCCCCACCCCAAATGTGATGTCGATAACAACAAGACAATATTATTCAAATTTGTTTTACCAGCTTCAGGTTCAATTGCGTCAGTTTTGTGCATTGTGTTCCTTCTACTAATAGATCGCTACTTCAAAACGAAAGGAGATGATCATGCAACGCTTGAAAAGTTTTTGAAGGATTACGAAGCTCTCAAGCCTACAAGATTTTCCTATGCTGATCTCAAAAGAATTACAAACAATTTCAAGGATAAAATAGGCGAAGGAGCTCATGGATCAGTGTTCAAAGGTAAGCTATCCAATCAGATTATAGTAGCTGTGAAGTTACTGAATAACTCTGATGACAATGGGAAGGACTTCATTAATGAAGTAGGGACTATGGGTAAAATTCATCACATCAATGTTGTTCGTTTGCTTGGCTTTTGTGCTGATGGTTTTCACAGTGCTCTTATTTATGACTTTTTTCCAAATGGTTCCCTCCAAAAGTTCATATCTTCCCCAGACAACAAGGAAAATTTTCTTGGATGGTTGAAGTTGCAACAAATAGCTCTGGGCGTAGCCAAAGGGATTGAATATCTCCACCATGATTGTGATTATCAAATTCTTCATTTCGACATCAATCCTGGTAATGTGTTATTAGATCATAACTTTACTCCCAAAATTTCTGATTCTGGTCTAGCAAAATTGTGTTCCAAAAATCAAACTGCTGTGTCGATAACAGCAGCTAGAGGAACTTTAGGCTATATTGCACCTGAGGTTTTCTCTAAAAACTTTGGAAATGTTTCATATAAATCAGATGTCTATGGTTATGGGATGTTATTGTTAGAAATAGTTGGAGGAAGGAAAAATACTCACACAAGTGAAGAAGCTTTCCAAATTTTATATCCAAAGTGGATCCATAATTTGATTGAAGGGGGAGACACAAATATTCACATTGAAGATGAAGATGACAATAAAATTGCTAGGAAACTAGCAATTGTGGGACTTCGGTGCATCCAATGGCATCCGATCAGTCGTCCATCCATGAAAACATTGATATAG 1614 0.3903 MVCCQRALWLVIMQVLVLLMNLGNAQNQCVPDDESVPFRLVQATLDSNPCSTTTNNVEMVEFPGVLALQGVRLAVLEKHYESRILKLCDVEGCLPKLFLRLHRSSIYPFQFETVRSASSNKSFGVTFFDCSSIGSEYLKNDDYSFQANLRVCPIYVVGSTEGILERDVTSCTKMLHLDSPLDQDDFLFNNFNFRWPHPKCDVDNNKTILFKFVLPASGSIASVLCIVFLLLIDRYFKTKGDDHATLEKFLKDYEALKPTRFSYADLKRITNNFKDKIGEGAHGSVFKGKLSNQIIVAVKLLNNSDDNGKDFINEVGTMGKIHHINVVRLLGFCADGFHSALIYDFFPNGSLQKFISSPDNKENFLGWLKLQQIALGVAKGIEYLHHDCDYQILHFDINPGNVLLDHNFTPKISDSGLAKLCSKNQTAVSITAARGTLGYIAPEVFSKNFGNVSYKSDVYGYGMLLLEIVGGRKNTHTSEEAFQILYPKWIHNLIEGGDTNIHIEDEDDNKIARKLAIVGLRCIQWHPISRPSMKTLI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5311g00035 537 SUPERFAMILY Protein kinase-like (PK-like) 255 536 IPR011009 -
Pral5311g00035 537 Gene3D Phosphorylase Kinase; domain 1 246 345 - -
Pral5311g00035 537 ProSiteProfiles Protein kinase domain profile. 271 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00035 537 Pfam Protein tyrosine and serine/threonine kinase 273 536 IPR001245 GO:0004672|GO:0006468
Pral5311g00035 537 FunFam Os07g0541700 protein 346 436 - -
Pral5311g00035 537 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Pral5311g00035 537 FunFam serine/threonine-protein kinase PBS1-like 241 345 - -
Pral5311g00035 537 Gene3D Transferase(Phosphotransferase) domain 1 346 537 - -
Pral5311g00035 537 PANTHER RUST RESISTANCE KINASE LR10-RELATED 243 536 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5311g00035 Pral-Chr5311 282899 284745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5311g00035 216 537 Receptor kinase-like Gene Family AT1G66910 45.808 1.01e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5311g00035 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5311g00035 - - tpra:123893290 561.607