Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5311g00033 ATGCGTGTTTGCCCGATTTATGTTGTTGACTCCACCGAAGGTATCCTGGAGGAGGACGTAACCTTTTGCACCAAGATGTTTCAGTTAGTAACGCGATTAGACCCATATGATGTTCAACAGAACAGATTGATCTTTCGATGGTCCAAACAGAAATGTCCTGCTGAAAAGAGAGAGAAATCATTCAAATTTGTTTTACCAACTTCAGGTTCGATTGTCTTGGTGTTGTGCATTATGTTCCTTCTACTAATATATCGCTACTTCAAAACAAAAGGAGATGATCATGCAAGACTTGAAAAGTTTTTGAAGGATTACGAAGCTTTCAAGCCCACAAGATTTTCCTATACTGATCTCAAAAGAATCACAAACAATTTCAAGGATGAAATAGGCGAAGGAGCTCATGGATCAGTCTTCAAAGGTAAGCTCTCCAATCAGATTATAGTAGCTGTGAAGGTACTCAACAACTCTGATGACGATGGCAAGGATTTCATTAATGAAGTAGGGACTATGGGCAAAATTCATCACATCAATGTTGTTCGTTTGTTGGGCTTTTGTGCTGATGGTTTTCGCCGTGCTCTTATTTATGATTTTTTCCCCAATGGTTCCCTCCAAAAGTTCATATCTTCCCCTGACAACAAAGAAAATTTTCTTGGATGGCTGAAGTTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAGTATATCCATTATGATTGTGATTATCGAATTCTTCATTTTGACATAAATCCTGGTAATGTGTTATTAGGTCACAACTTTACTCCCAAAATTTCTGATTTTGGTCTAGCAAAATTGTGTTCTAAAACTCAGAGTGCTGTATCAATTACGAGAGCAAGAGGAACTTTAGGTTATATTGCACCTGAAGTTTTTTCAAAAAATTTTGGAAATGTTTCATATAAGTCAGACATCTACAGTTATGGCATGTTATTGTTAGAAATGGTAGGAGGAAGGATAAATACCCACACAAGTGAAGAAGCTACCCAAATTTTATATCCAAAATGGATCCATAATTTAATTGAAGGAGGAGACATAAATGTTCAGATTGAAGATGAAGATGACAGTAGAATCGCAAGGAAACTAGCAATTGTGGGACTTTGGTGCATCCAATGGCATCCAATCAGCCGTCCATCCATGAAAACAGTGGTACGAATGTTAGAAGGAGAAGGTGATGAATTAAAGGTGCCACCATCAATTCAATTTGACTCCATAAATTCCTTCACTACAGGAAGTGATATTCCAACAAGACATTTGAATTTAGGGTTAGAAATTATTCATGAATTAGAATAA 1305 0.3709 MRVCPIYVVDSTEGILEEDVTFCTKMFQLVTRLDPYDVQQNRLIFRWSKQKCPAEKREKSFKFVLPTSGSIVLVLCIMFLLLIYRYFKTKGDDHARLEKFLKDYEAFKPTRFSYTDLKRITNNFKDEIGEGAHGSVFKGKLSNQIIVAVKVLNNSDDDGKDFINEVGTMGKIHHINVVRLLGFCADGFRRALIYDFFPNGSLQKFISSPDNKENFLGWLKLQQIALGIAKGIEYIHYDCDYRILHFDINPGNVLLGHNFTPKISDFGLAKLCSKTQSAVSITRARGTLGYIAPEVFSKNFGNVSYKSDIYSYGMLLLEMVGGRINTHTSEEATQILYPKWIHNLIEGGDINVQIEDEDDSRIARKLAIVGLWCIQWHPISRPSMKTVVRMLEGEGDELKVPPSIQFDSINSFTTGSDIPTRHLNLGLEIIHELE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5311g00033 434 ProSitePatterns Protein kinases ATP-binding region signature. 128 150 IPR017441 GO:0005524
Pral5311g00033 434 Gene3D Phosphorylase Kinase; domain 1 97 196 - -
Pral5311g00033 434 PANTHER RUST RESISTANCE KINASE LR10-RELATED 96 404 IPR045874 GO:0004672
Pral5311g00033 434 Gene3D Transferase(Phosphotransferase) domain 1 197 400 - -
Pral5311g00033 434 FunFam serine/threonine-protein kinase PBS1-like 92 196 - -
Pral5311g00033 434 FunFam PR5-like receptor kinase 197 402 - -
Pral5311g00033 434 SUPERFAMILY Protein kinase-like (PK-like) 105 392 IPR011009 -
Pral5311g00033 434 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5311g00033 434 Pfam Protein kinase domain 125 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5311g00033 Pral-Chr5311 262718 264217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5311g00033 69 413 Receptor kinase-like Gene Family AT1G66910 46.197 2.23e-101 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5311g00033 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5311g00033 - - tpra:123893290 574.704