Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5309g00043 | ATGAGTTACTCGAAGGATTCACCTCGCCGTCCGAACGACGTAGAGGCGGGGAATAGTCGCTCCGGCGACTCTGAGAACGGGGAGTGCTCGTACGATCCATTTGATATTTCCAGTACAAAAAATGCTTCCATTGAACGGCTCAGGCGGTGGAGGCAAGCTGCGCTTGTGCTCAATGCTTCTCGTCGATTCCGTTATACCCTGGACCTGAAAAAAGAAGAGGAGAAGCAACAAACACTGAGGAAGATTAGGGCGCATGCTCAAGCCATTAGGGCTGCATATCTTTTCAAAAAAGCTGCTGTGCCACCTGTGAATGTTTCAGGGATTCCAGCACCACCTCCAGCTGCTTCTGGTGACTTTCCAATTGGGCAAGAGCAGCTTGCTTCAATTTCAAGGGATCATAACAGTGATGTCCTGCAGCAATATGGAGGGGTTCAAGGGCTTGCACAGTCGTTGAAAACCAATTTAGGGAAGGGAATTCATGGTGATGATGGTGACTTAATGAAGCGGAGGAATGCGTATGGGTCAAACAACTATCCTCGGAAGAAGCCCAGGAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCCTGGTTATATTAATGGTTGCGGCGGTGGCTTCATTGGCGCTAGGAATAAAATCTGAGGGTATCAAGGAAGGATGGTATGATGGGGGTAGCATTGCATTTGCAGTTATTCTTGTTATTGTGGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGTGATTTAAATGAGGAGAAGAGAAATATACATCTAGAGGTTATAAGAAATGGCAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTTATACCTCTGAATATTGGTGACCAGGTCCCTGCTGATGGAATTATGATCATTGGTCACTCCCTTGCAATTGATGAATCAAGTATGACTGGCGAGAGCAAGATTGTTCACAAGGACTCAAAGGACCCCTTTCTGATGTCTGGATGTAAAGTTGCAGATGGAAGTGGCACCATGCTGGTTACAGGTGTTGGTATTAATACTGAGTGGGGGCTTTTAATGGCTAGTATATCGGAAGACACTGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGCGTCGCCACCTTCATTGGTATTGTTGGGCTAACTGTGGCTGCTGTTGTTCTGGTTGTGCTACTGGTCAGATATTTTACTGGGCATACCGAAAACTCAGATGGGAGCCCTCAGTTTAAGGCGGGCCATACGAAACTTGGTGTTGCTATTAACGGAGCAATTAAGATAGTCACAGTTGCCGTCACCATTGTAGTGGTTGCAGTGCCTGAAGGGCTTCCTTTAGCAGTCACTTTAACACTTGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGTTCTGCCACAACCATTTGCAGCGATAAGACTGGAACATTGACTTTGAATCAGATGACTGTGACAGAAGCTTACATTGGAGGGAAGAAGACTAATCCTCCTCACAACAAATCCGAGCTCCCTGATAAGTGCCGCTCTTTGCTTGTTGAAGGTGTTGCACAAAATACCAATGGCAGTGTTTATGTACCTGAGGGTGGTAACAACGTTGAGGTCTCTGGATCACCAACAGAAAAGGCAATTTTGAACTGGGGAATTCAGCTGGGGATGGATTTTGAGGCTGTCAGATCAGAGTCATCAATTATACACGTCTTTCCATTCAATTCAGAGAAAAAACGTGGGGGAGTTGCAGTGAGGACGCCTGACTCTAAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTACTGGCCTGTTGTGCAGCATATATGGATGCACAGAACCAGTCAGTAGACATGGATGAAGAGAAGATGACATATTTTAGAAAAGCTATTGAAGTCATGGCTGCTGACAGTCTTCGCTGTGTTGCCATTGCATATAGACCTTATGAAATAGAGAAAGTTCCAACTAGTGAAGAAGAACTTGCTCGCTGGTCATTGCCCGAGGATGATCTTATTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGGCCGGGTGTCAAGGATGCAGTGCAACTTTGTCAAAAAGCTGGAGTGAAGGTGCGAATGGTCACCGGCGACAATGTGCAAACGGCAAAAGCAATTGCTCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCTGGGAGCCAAACATTATTGAAGGCAAAAGATTTCGGGAGTTATCAGACAGAGAGAGAGAGGATATTGCAGAAAGGATATCGGTTATGGGGCGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAACCTTGAGAAAGAAGGGGCATGTTGTTGCTGTGACTGGGGATGGAACTAATGATGCTCCCGCATTGCATGAGGCTGATATAGGTCTTGCAATGGGCATCCAAGGGACAGAAGTTGCTAAAGAAAGCTCTGATATCATCATTTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGACGGTCTGTATATGCAAATATCCAGAAGTTTATACAGTTTCAGCTTACAGTAAATGTGGCAGCTCTTGTAATTAATGTTGTTGCTGCAGTTTCTTCTGGTGATGTCCCGCTGAATACAGTGCAGCTTCTCTGGGTAAATCTGATTATGGATACCCTAGGAGCACTAGCCTTGGCAACTGAACCTCCAACTGATCACCTAATGGATCGATCTCCTGTGGGCCGAAGGGAACCTCTCATAACAAATATCATGTGGAGGAATTTGCTTATACAGGCAATATACCAAATATCTGTTTTGCTTGTACTCAATTTCCGAGGCAGGAGCCTACTGGGTCTGAAGCATGATGATTTAGCCCATTCTCTCAAAGTGAAGAACACTTTAATATTTAATGCATTTGTTTTCTGTCAAATCTTTAATGAATTCAATGCTCGAAAGCCAGATGAATACAACATCTTCAAGGGAGTCACAAGAAACTACCTCTTTATGGGGATAGTGGGCATAACTCTTGTGCTTCAGATTATCATAATTGAATTTTTGGGGAAGTTCACCAAGACAGTCAGGCTTAACTGGAAGATGTGGATAGTTTCCGTCGTCATTGGAGTCATCGGCTGGCCTCTTGCTGCGGCTGGGAAGCTGATACCCTTGCCTGAAACTCCCTTCAGCGAGTTTTTCACGAGATGTTTCCGGCGATGA | 3216 | 0.4481 | MSYSKDSPRRPNDVEAGNSRSGDSENGECSYDPFDISSTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKQQTLRKIRAHAQAIRAAYLFKKAAVPPVNVSGIPAPPPAASGDFPIGQEQLASISRDHNSDVLQQYGGVQGLAQSLKTNLGKGIHGDDGDLMKRRNAYGSNNYPRKKPRSFLMFVWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGDQVPADGIMIIGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAAVVLVVLLVRYFTGHTENSDGSPQFKAGHTKLGVAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVTEAYIGGKKTNPPHNKSELPDKCRSLLVEGVAQNTNGSVYVPEGGNNVEVSGSPTEKAILNWGIQLGMDFEAVRSESSIIHVFPFNSEKKRGGVAVRTPDSKVHIHWKGAAEIVLACCAAYMDAQNQSVDMDEEKMTYFRKAIEVMAADSLRCVAIAYRPYEIEKVPTSEEELARWSLPEDDLILLAIVGLKDPCRPGVKDAVQLCQKAGVKVRMVTGDNVQTAKAIALECGILGSSADAWEPNIIEGKRFRELSDREREDIAERISVMGRSSPNDKLLLVQTLRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAIYQISVLLVLNFRGRSLLGLKHDDLAHSLKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTRNYLFMGIVGITLVLQIIIIEFLGKFTKTVRLNWKMWIVSVVIGVIGWPLAAAGKLIPLPETPFSEFFTRCFRR | 1071 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5309g00043 | 1071 | Pfam | Cation transporter/ATPase, N-terminus | 141 | 209 | IPR004014 | - | |
Pral5309g00043 | 1071 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 133 | 1055 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Pral5309g00043 | 1071 | Gene3D | - | 42 | 97 | - | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 809 | 1058 | - | - | |
Pral5309g00043 | 1071 | Pfam | Cation transporting ATPase, C-terminus | 877 | 1054 | IPR006068 | - | |
Pral5309g00043 | 1071 | MobiDBLite | consensus disorder prediction | 17 | 35 | - | - | |
Pral5309g00043 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 424 | 508 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Pral5309g00043 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 759 | 872 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Pral5309g00043 | 1071 | Gene3D | - | 167 | 360 | - | - | |
Pral5309g00043 | 1071 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 486 | 492 | IPR018303 | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 494 | 692 | - | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 239 | 360 | - | - | |
Pral5309g00043 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 603 | 621 | - | - | |
Pral5309g00043 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 477 | 498 | - | - | |
Pral5309g00043 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 227 | 247 | - | - | |
Pral5309g00043 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 864 | 885 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 707 | 717 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 484 | 498 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 792 | 811 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 816 | 828 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 308 | 322 | - | - | |
Pral5309g00043 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 685 | 696 | - | - | |
Pral5309g00043 | 1071 | SFLD | p-type atpase | 466 | 844 | IPR044492 | - | |
Pral5309g00043 | 1071 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 141 | 1055 | IPR023298 | - | |
Pral5309g00043 | 1071 | Gene3D | - | 192 | 1043 | - | - | |
Pral5309g00043 | 1071 | Gene3D | - | 494 | 692 | IPR023299 | GO:0000166 | |
Pral5309g00043 | 1071 | SFLD | Haloacid Dehalogenase | 466 | 844 | - | - | |
Pral5309g00043 | 1071 | SUPERFAMILY | Calcium ATPase, transduction domain A | 262 | 357 | IPR008250 | - | |
Pral5309g00043 | 1071 | Gene3D | - | 481 | 837 | IPR023214 | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 338 | 508 | - | - | |
Pral5309g00043 | 1071 | SMART | Cation_ATPase_N_a_2 | 140 | 214 | IPR004014 | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 192 | 249 | - | - | |
Pral5309g00043 | 1071 | PANTHER | CATION TRANSPORTING ATPASE | 83 | 1056 | - | - | |
Pral5309g00043 | 1071 | SUPERFAMILY | HAD-like | 482 | 897 | IPR036412 | - | |
Pral5309g00043 | 1071 | Pfam | haloacid dehalogenase-like hydrolase | 481 | 806 | - | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 42 | 98 | - | - | |
Pral5309g00043 | 1071 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 32 | 74 | IPR024750 | GO:0005516 | |
Pral5309g00043 | 1071 | Pfam | E1-E2 ATPase | 262 | 462 | - | - | |
Pral5309g00043 | 1071 | CDD | P-type_ATPase_Ca_PMCA-like | 168 | 925 | - | - | |
Pral5309g00043 | 1071 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Pral5309g00043 | 1071 | FunFam | Calcium-transporting ATPase | 685 | 837 | - | - | |
Pral5309g00043 | 1071 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 491 | 689 | IPR023299 | GO:0000166 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5309g00043 | Pral-Chr5309 | 299946 | 329498 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5309g00043 | 6 | 1065 | Primary Pumps ATPases | AT4G29900 | 74.600 | 0.0 | 1598 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5309g00043 | K01537 | - | gmx:100792945 | 1725.68 |