Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5307g00001 ATGAAGAGGAAGGTCTATTTCCCTCTTCTCATTGCCTTCTTCTTAGGCACACTTTCTCTCTGTGTCTCCGCCGATGTTCCCATTACCAGCCATGGAGCTCTCACTGATGCTGAGGCCATGTATATCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGGGGAGAACACGTCACTGTCGATCCTTCTCTGGTTTTCGAGAACAATCGCATAAAAAATGCTTATATGGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGAACAATTGTACGCTCAATTGGGTTGGAGCAAATGTCTGTGACTATAGCAACGTTTTCTGTGCTCCGGCGATTGACAACCCGAAGGTTCGTACTGTTGCTGGCATTGATCTCAACCACTGCGACATTGCTGGGTACTTGCCGGAAGAGCTTGGACTACTCGCGGATCTTGCTCTCCTCCACATCAACACCAACAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAGCTCCTGTTTGAACTGGATCTCAGCAACAATAGGTTCGCTGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACAGTGCCTAGAGAGCTTTTTGATAAGGATCTGGACGCTATCTTTATAAACAACAATCGGTTTGTGTTCGATCTTCCCGACAATTTCGGCAACTCTCCGGTGTCGGTCATTGTCGTAGCCAACAACAAGTTCCATGGCTGTCTCCCAGCGAGCTTGGGCAACATGACAAACCTTAATGAGATCATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGATACCATCGGAGGCATGGTGAGCCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAACCTGCAGAACTTCACATATTCATATAACTTCTTCACTGGTGAGCCCCCGTCGTGCCTCAGTTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCGAGGCCATTACAGAGGTCAGCCGCACAATGCAAAGCTTTCTTATCAAGGCCTGTTGACTGTAACTCGTTTAAATGTAAGCCATTTGTTCCATCGGTTCCTCCGCCTCCCAACCCTTCCCCTCCGATACCGGTACCTTCCCCACCACCCGTTGTCGTCCCTTCACCTCCTCCCTCACCAGTATTTGTTCCACACTCTCCGCCTCCACCTTCCCCGCCACCTCCAGTATATTCGCCCCCACCGCCTCCTCCGTCGCCACCTCCGCCAGTCTACTCACCACCACCTCCTCCGCCAGTCTACTCTCCACCACCTCCTCCGCCTTCACCACCCCCACCGTCACCTCCCCCACCTTCACCTCCTCCGCCAGTCTATTCTCCACCGCCGCCGCCACCGTCACCTCCACCTCCCTCACCACCCCCGCCAGTCTATTCACCACCACCACCACCACCGTCCCCGCCGCCACCTTCACCTCCACCTCCTTCTCCATCCCCGCCACCACCTTCACCTCCCCCTCCATCTCCTCCACCACCTTCACCTACTCCAACGCCACCATACTGCGTCCGTTCTCCACCGCCACCGCCACCAAATTCACCACCACCACCACCACCGTCTCCTGTATTCTACCCTCCACCGACATACAGCTCGCCTCCGCCACCTCATCACTCACCTCCGCCACCTCCCCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCATTTATACACCACCACCTCCTCCAGTCTATTCTCCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCGTGTATAGAACCACCACCACCTCCACCACCTTGTGAAGAGCATCAACCGCCGCCACCTTCCCCCACACCTTATTTACCACCTCCCTCCCCATCTCCCCCTCCACCACCAGCTCCTGTTCACTACAGTTCTCCACCGCCGCCACCTGTTCAGTACAATTCGCCGCCGCCGCCCCCGCCCGCAGTTCACTATGGTTCTCCCCCACCACCAGTGTACCATTCTCCTCCACCGCCATCACCGCCTCCCTGTGAAGAATCTCCGCCTGCCCCGTCCCCACCTCCACCGGTCACGTACGGAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2298 0.5461 MKRKVYFPLLIAFFLGTLSLCVSADVPITSHGALTDAEAMYIRQRQLLYYRDEFGDRGEHVTVDPSLVFENNRIKNAYMALQAWKQAILSDPNNCTLNWVGANVCDYSNVFCAPAIDNPKVRTVAGIDLNHCDIAGYLPEELGLLADLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAAQCKAFLSRPVDCNSFKCKPFVPSVPPPPNPSPPIPVPSPPPVVVPSPPPSPVFVPHSPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPTPTPPYCVRSPPPPPPNSPPPPPPSPVFYPPPTYSSPPPPHHSPPPPPHSPPPPPHSPPPPIYPIYTPPPPPVYSPPPPVHSPPPPSPPPCIEPPPPPPPCEEHQPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPPVQYNSPPPPPPAVHYGSPPPPVYHSPPPPSPPPCEESPPAPSPPPPVTYGNPPPAPVYEGPLPPVFGVSYASPPPPPFY 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5307g00001 765 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 521 - -
Pral5307g00001 765 PRINTS Proline rich extensin signature 404 420 - -
Pral5307g00001 765 PRINTS Proline rich extensin signature 426 443 - -
Pral5307g00001 765 PRINTS Proline rich extensin signature 446 471 - -
Pral5307g00001 765 MobiDBLite consensus disorder prediction 429 610 - -
Pral5307g00001 765 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
Pral5307g00001 765 Gene3D Ribonuclease Inhibitor 240 370 IPR032675 -
Pral5307g00001 765 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Pral5307g00001 765 MobiDBLite consensus disorder prediction 622 752 - -
Pral5307g00001 765 Gene3D Ribonuclease Inhibitor 78 239 IPR032675 -
Pral5307g00001 765 SUPERFAMILY L domain-like 79 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5307g00001 Pral-Chr5307 17944 21031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5307g00001 22 460 Leucine-rich Repeat extension Gene Families AT3G24480 69.318 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5307g00001 - - qsa:O6P43_007947 681.789