Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5306g00017 ATGAGTCCGATCAGTAGCATTTCCATGAGCCCCAACGGCGGCGCCTCCATTACCGAAATCGACGGTCGACACTCGGTGAACTTCGCGGCGCCGAGGGGGTTTGCAACGAAACTGAAGTCGGCAATGAAAGAAACGCTGTTCCCAGACGACCCTTTCAGGCAGTTCAAGAACGGAGAGACGAGGAGAGATAGAATTGTGAAAGGAGTACAGTACTTCGTCCCAATGTTCGAATGGCTTTCCACTTACAATCTCCGGTTGTTCTGGTCGGACCTCGTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGTTACGCTAAACTCGCCGAAATTCCTCCCATCATTGGCCTCTATAGTAGTTTTGTTCCTCCACTGGTGTATGCGATATTCGGAAGTTCGAGGCAGATGGCGGTGGGAACGATAGCGGCGGCGTCCTTACTGTTATACCAAACGGTGTCGAGCGTGGCGATGCCGGAGAACGACCCTGTTCTGTATGTGCATTTGATTTTCACCACCACCTTCATCACCGGAGCATTTCAGGCTGCTTTAGGTATTCTCAGGTTAGGGATATTGGTGGATTTCTTATCGCATTCGACCATAACAGGCTTCATGGGGGGCACAGCGGTAATTCTGTGTCTGCAACAGCTGAAGGGCATATTTGGTATGAAACATTTCTCTAGTCACACCAGCCTTATCTCTGTGCTCAAGGCCATCGTCGCCAATAGACATGAGATAAGATGGGAGACCACAGTCATGGGCGTCATCTTCGTTGCCTTCTTGATGTTCACTAAGTACTTGAAGAAGAGAAATCAGAAGCTGTTTTGGGTGGCAGCTATAGCTCCAATAACAACAGTGATCGTTGGAGCTATATTTACCTACCTTGTCAAGGGCCACCATCATGGAATTCAAATTGTGGGTCACCTAGATCGAGGCTTAAATCCTATATCCATCAGCTTACTAAACTTCGATCCTAAATATTTACCAGCAGTCCTAAAAGCCGGCATTATCACTGGCGTTTTGTCATTAGCGGAAGGTATAGCAATAGGAAGAAGTTTCGCCGTGGCAGAAAATACCCCTCATGATGGGAACAAGGAAATGGTCGCATTTGGTCTTATGAACCTTCTCGGCTCTTTCACTTCATGCTACTTGACCAGTGGGCCATTTTCGAAGAGTGCGGTGAATTACAACTCAGGGGCAAAGACGCCGATGTCAAACGCAGTGCAAGCAGTGTTAATGGCGATGACGCTCCTATTTTTAGCTCCTTTGTTTGGACACACTCCTCTGGTGGCACTGTCAGCCATCATCATATCAGCCATGTTGGGACTCATCAATTATGAAGAAGCCATCCATCTCTATAAGGTCGACAAGTTTGACTTCCTCGTTTGCATGTCTTGCTTCTTAGGTGTCACCTTCATCAGCATGGACGTTGGCCTCTTCTTATCTATTGGACTTGGTGTGTTGAGGGCACTGTTGTACGTGGCTAGACCAGCCTCATGCAAGCTTGGAAAGATCCCAAACTCGTCTCTGTACAGAGACGTCGAGCAGTATCCAATTTCAACCATATTCCCAGGCATTCTAATCATTCAAGTTGGTTCTCCTATCTACTTCGCTAACTCTTCCTACGTCAAAGACAGGATCCTGAGGTATATTCAAAGCGAGGAGAGTTCTTGTACTGGGAATACTGTAGAGCAGATCATACTCGATTTGTCAAGCGTGACCTCCATTGATGTAACTGCTATTAGAGGAATATATGAGATACGTAAAGTCCTGGAGAAAAATGGAAAGCAGTTGTCAATAGTGAACCCAAGGAAGGAAGTCATGGAGAAGCTAATAACATCAAAGTTTGTAGATGTGGTTGGGAAAAAGTCCTTCTTTTTTAGTGTGGATGATGCCGTGGCGGCTTGTCAGTTTCAGCTTAGTGCATCCAAAGCAAATCCTTGA 1950 0.4697 MSPISSISMSPNGGASITEIDGRHSVNFAAPRGFATKLKSAMKETLFPDDPFRQFKNGETRRDRIVKGVQYFVPMFEWLSTYNLRLFWSDLVAGLTITSLAIPQGISYAKLAEIPPIIGLYSSFVPPLVYAIFGSSRQMAVGTIAAASLLLYQTVSSVAMPENDPVLYVHLIFTTTFITGAFQAALGILRLGILVDFLSHSTITGFMGGTAVILCLQQLKGIFGMKHFSSHTSLISVLKAIVANRHEIRWETTVMGVIFVAFLMFTKYLKKRNQKLFWVAAIAPITTVIVGAIFTYLVKGHHHGIQIVGHLDRGLNPISISLLNFDPKYLPAVLKAGIITGVLSLAEGIAIGRSFAVAENTPHDGNKEMVAFGLMNLLGSFTSCYLTSGPFSKSAVNYNSGAKTPMSNAVQAVLMAMTLLFLAPLFGHTPLVALSAIIISAMLGLINYEEAIHLYKVDKFDFLVCMSCFLGVTFISMDVGLFLSIGLGVLRALLYVARPASCKLGKIPNSSLYRDVEQYPISTIFPGILIIQVGSPIYFANSSYVKDRILRYIQSEESSCTGNTVEQIILDLSSVTSIDVTAIRGIYEIRKVLEKNGKQLSIVNPRKEVMEKLITSKFVDVVGKKSFFFSVDDAVAACQFQLSASKANP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5306g00017 649 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Pral5306g00017 649 SUPERFAMILY SpoIIaa-like 522 638 IPR036513 -
Pral5306g00017 649 Pfam Sulfate permease family 87 466 IPR011547 GO:0016020
Pral5306g00017 649 FunFam Sulfate transporter 31 498 641 - -
Pral5306g00017 649 ProSiteProfiles STAS domain profile. 518 638 IPR002645 -
Pral5306g00017 649 CDD STAS_SulP_like_sulfate_transporter 519 631 - -
Pral5306g00017 649 NCBIfam sulfate permease 74 634 IPR001902 GO:0016020|GO:0055085
Pral5306g00017 649 Gene3D STAS domain 498 641 IPR036513 -
Pral5306g00017 649 PANTHER SULFATE TRANSPORTER 36 641 IPR001902 GO:0016020|GO:0055085
Pral5306g00017 649 Pfam STAS domain 523 634 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5306g00017 Pral-Chr5306 143789 150867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5306g00017 4 646 Inorganic Solute Cotransporters AT5G19600 59.876 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5306g00017 K17471 - qsa:O6P43_007946 905.59