Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5306g00011 ATGGACAATATCGTGGAAGATGATGCAACGTACCCTCGAAAGCCCTACGCTTCAAGCCGTCCTAACTATTCCCATCGCCAAGAGCACTTGGTTCGCGCCGCCCCATATCGTCGTCAAGTGATTAGTCGATACGACGAGGACGGTGATGATGAAGAAATGGATGAATATGATGTAGGGAATGACCTGGAGGACGGCGATGGTGAAGGGGAAAATGGTTATGGTATGAATATTGATAGCGAAGACGAGTGTGAGAAAAACCCGAAGAAAAGGAAATTGCGGAATCCGTCTGTTTCGAACTATGAGTTGGTACCTCATGGGAAGCTTTCGCATGGGAATCGAAGCCCAACAGATGAATGGACGGAGCATGCGACGTTTGTTTTGCTAGAGGTTTGGGGGGACAAATTTCTTCAACTTGGGAGAAAGAGCTTAAGGTCCGAGGATTGGCATGATGTGGCCGAGAAGTTTTCGGAGGAGCTGAAGATGGAGAGGACCGTGGCACAGTGTAGGAGCATGTTGGATAAACTGAAAAGAAGGTACAAGAAAGAGAAAGCGAAAATGGATGAAATGGGGTTGAGTTCTAGTAAATGGGCTTATTTTAAGAAGATGGATATGTTAATGGCTTCATCAGCGAGGCAAGAATATGGACTGTCCTGTGGAATGGACTCTGGGGAGTATGTTTTCATGAATACAAGGGTTTATTTAGATAGATCGAATGGGCTGGATGAGATGAGAGATAGCCCTGGGGAGTCAGAGACGTCTGAAGATGATTCGGATGGGCTTCCACCCAGGAGGACTAGGATTGGAGACAATGATAATGGAGAAGAGTCTTCCTTTAGGGAATTAGCTGATTCTATTCAGAAGTTTGGGAAAATATATGAGAAGATTGAGAATCGTAAGAGGCGGCAGATGATGGAGTTGGAGAAGATGAGATTGGATTTTAATAGGGAGTTAGAACTGCAGAAGAAGCAGATTCTGGAAAGAGCTCAGGCCGAAATTGCAAGCTTGCAAGAAGGAGGTGAGGAGGATTCCGAGACATCTACAGAGAATGGCAGTGAATGA 1059 0.4561 MDNIVEDDATYPRKPYASSRPNYSHRQEHLVRAAPYRRQVISRYDEDGDDEEMDEYDVGNDLEDGDGEGENGYGMNIDSEDECEKNPKKRKLRNPSVSNYELVPHGKLSHGNRSPTDEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWHDVAEKFSEELKMERTVAQCRSMLDKLKRRYKKEKAKMDEMGLSSSKWAYFKKMDMLMASSARQEYGLSCGMDSGEYVFMNTRVYLDRSNGLDEMRDSPGESETSEDDSDGLPPRRTRIGDNDNGEESSFRELADSIQKFGKIYEKIENRKRRQMMELEKMRLDFNRELELQKKQILERAQAEIASLQEGGEEDSETSTENGSE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5306g00011 352 Coils Coil 292 323 - -
Pral5306g00011 352 Gene3D - 119 181 - -
Pral5306g00011 352 Coils Coil 165 192 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 1 116 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 46 68 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 78 95 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 337 352 - -
Pral5306g00011 352 Pfam Myb/SANT-like DNA-binding domain 117 204 IPR044822 -
Pral5306g00011 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 94 337 IPR044823 -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 330 352 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 25 45 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 238 278 - -
Pral5306g00011 352 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5306g00011 Pral-Chr5306 110466 112872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5306g00011 245 337 Trihelix Transcription Factor Family AT3G14180 37.624 2.86e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5306g00011 Myb_DNA-bind_4 2.1e-18 CL0123