Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5306g00007 ATGGCAAGTCTCTCTCATCATGTCCATCCTCATTCATCTCTCAATACTCCAACCATCAAGTTCACCAAGCTATTCATCAATGGACAATTCCTTGATTCCATTTCAGGAAGAGCATTTGAGACTGTGGACCCAAGAACAGAGGAAGTGATCACCGAAGTAGCCGAGGGGACTGAAGAAGACGTTGATCTCGCCGTGAAGGCGGCGCGCGTCGCTTTCGATTCTGGTCCATGGCCGCGCATGACCGGCTCTGAGAGAGCGAAGATAATGATGAGATGGGCCGATCTAATTGAAGAGAACTTAGAGGAGATAGCTGCCTTGGACACCATTGATGGGGGTAAGCTATACACGTCGTGTAAGGCGGTTGATATTCCTCATGTAGCTAGTCTTCTTCGTTACTACGCGGGCGCTGCTGATAAGATTCATGGAGAGGTGTTGAAATCGTCAAGGAATTTTCACGCTTATACCTTGATGGAACCTATTGGTGTTGTTGGCCACATCATACCCTGGAATTTCCCTACCCACATGTTCTTCGCCAAAGTTAGTCCTGCCTTGGCTGCTGGCTGCACCATGGTCCTTAAACCTGCTGAGCAAACTCCTCTCTCTGCTCTCTTTTATGCTTATCTTTCTCAGCTGGCTGGAATCCCAGACGGGGTGCTCAATGTGATACCTGGGTTTGGCCGGACTGCTGGTGCTGCAATAAGCTCTCATATGAACATTGATGCGGTGAGTTTTACTGGTTCAACAGAAACTGGTCGTCGAGTAATGCAGGCAGCAGCAATGAGTAATTTGAAACCAGTTTCACTGGAATTAGGAGGCAAGTCACCCCTCATAATTTTCAATGATGCTGATGTTGACAGGGCCGTTGATCTTGCCCTGTTTGGCATCTTATGCAACAAGGGGGAGGTTTGTGTTGCAAGTTCCAGAGTTTATGTTCATGAAGGGATTTATGAGGAATTTGAGAAGAAGGTGGTGGAGAAATCCAAAGCTTGGGTGGTGGGAGACCCTTTTGATCCTAAAGTTCAGCAAGGACCCCAGGTTGACAAGAAGCAATTTGATAAAATTCTTTCATATATTGAGCACGGAAAGAGAGAAGGAGCCACTTTGTTGACTGGGGGTAAGCGAGTGGGCAACAAGGGATACTATATTGAACCCACAATTTTTACCAACGTAAAGGAGGACATGCTAATAGCGCAGGACGAAATATTTGGGCCTGTGATGACACTATTTAAGTTCAAGAGCATTGAGGAAGCAATAAGGAGTGCCAACAACACCAGATATGGCCTAGCAGCTGGGATTGTGACGAAGAACTTGGATATAGCAAACACAGTGTCAAGGAACATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTTGCCTTTGATAATGACTTCCCTTATGGAGGGTACAAGATGAGCGGATTTGGAAGAGATTATGGACTTCATGCCCTTCACAAATATCTTCAAGTTAAATCTGTTGTAACGCCTATTTACAATTCTCCTTGGCTTTGA 1509 0.4579 MASLSHHVHPHSSLNTPTIKFTKLFINGQFLDSISGRAFETVDPRTEEVITEVAEGTEEDVDLAVKAARVAFDSGPWPRMTGSERAKIMMRWADLIEENLEEIAALDTIDGGKLYTSCKAVDIPHVASLLRYYAGAADKIHGEVLKSSRNFHAYTLMEPIGVVGHIIPWNFPTHMFFAKVSPALAAGCTMVLKPAEQTPLSALFYAYLSQLAGIPDGVLNVIPGFGRTAGAAISSHMNIDAVSFTGSTETGRRVMQAAAMSNLKPVSLELGGKSPLIIFNDADVDRAVDLALFGILCNKGEVCVASSRVYVHEGIYEEFEKKVVEKSKAWVVGDPFDPKVQQGPQVDKKQFDKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFTNVKEDMLIAQDEIFGPVMTLFKFKSIEEAIRSANNTRYGLAAGIVTKNLDIANTVSRNIRAGIVWINCYFAFDNDFPYGGYKMSGFGRDYGLHALHKYLQVKSVVTPIYNSPWL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5306g00007 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Pral5306g00007 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Pral5306g00007 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 492 - -
Pral5306g00007 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Pral5306g00007 502 SUPERFAMILY ALDH-like 9 498 IPR016161 GO:0016491
Pral5306g00007 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Pral5306g00007 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 290 - -
Pral5306g00007 502 Pfam Aldehyde dehydrogenase family 35 492 IPR015590 GO:0016491
Pral5306g00007 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Pral5306g00007 502 FunFam Aldehyde dehydrogenase3 272 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5306g00007 Pral-Chr5306 83389 87809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5306g00007 12 502 Aldehyde Dehydrogenase Gene Family AT3G24503 69.106 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5306g00007 K12355 - gmx:100784449 820.076