Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5302g00014 ATGGGAGAAGGTGAGGGGGCAGATTGCCCTCCCAAGAATGTGTCATCGGATGCTTCAGGAGCAGCGTTGCTGTCTGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGTTATAGTGGCGCGGCCTTGCCTGAACACCCGCAGCCTCAGTTGCAGGTGCTGGCGCAGAGTCAGCCGCAGCCACGCCCAGTTACAACGCAACCGGTTGTTGTGATGCCTATGCCACCGCAGGCTCCTCATTCTTCAGCCAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCACGACCCAACTTTGATATGAAGGATGTTACTCCAAAGAAGCAAAAACAGTGTAATTGCAAACACTCAAAATGTCTAAAGTTATATTGTGAATGCTTTGCATCCGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTCAGGCCAAAAATTGCAAGCAGCCCTCATGGAGCACGTGATAGCAGGGAGGATGCTGGTGAAATTTTAATACTTGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACCGGAGCAATTGGATCTTCTGGTTATTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGGCCAACAAGCAAGGACACATCTGTTGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAAAAGTCCTACACCGTCCTCATCCTTGTCTCCTGTCCCTGGTGCCCGTGTTGGAGCTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACACCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTAATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTGGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGGCGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGATGGGGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTCCATCCCCTAATGGTTCAATGGGTCATGCTTGCAATACATCTTTGCGTTCTCCTTACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATTGTTTTGACAAAGTTCAGAGATTTTCTTAATCGGGTCATCACAATGGGAGAATTAAATGGCAAAAACAAAATGTTCTTCATTAACCAGAAGTGA 1563 0.4587 MGEGEGADCPPKNVSSDASGAALLSDVPAKKLARQLDFTGYSGAALPEHPQPQLQVLAQSQPQPRPVTTQPVVVMPMPPQAPHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGARDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFGPTSKDTSVGRLGQFQQANHIKSPTPSSSLSPVPGARVGAATLGPSKFTYRSLLADIIQPHHLKELCSVLVLVSGQAAKTLTDQKMLMEKNAEDQVETSVASSTQEQLPSRKEGDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMGHACNTSLRSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNGKNKMFFINQK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5302g00014 520 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 198 232 IPR005172 -
Pral5302g00014 520 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 112 147 IPR005172 -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 53 68 - -
Pral5302g00014 520 Coils Coil 145 165 - -
Pral5302g00014 520 SMART CXC_2 195 236 IPR033467 -
Pral5302g00014 520 SMART CXC_2 110 150 IPR033467 -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 1 20 - -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 90 107 - -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 410 432 - -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 42 107 - -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 379 442 - -
Pral5302g00014 520 MobiDBLite consensus disorder prediction 382 396 - -
Pral5302g00014 520 ProSiteProfiles CRC domain profile. 111 235 IPR005172 -
Pral5302g00014 520 PANTHER TESMIN/TSO1-RELATED 48 507 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5302g00014 Pral-Chr5302 94561 105171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5302g00014 1 508 CPP Transcription Factor Family AT4G29000 57.328 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral5302g00014 TCR 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5302g00014 - - gmx:100777698 801.586