Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5302g00001 ATGAATAGAGGTGTTGTTCAGAGCTCACCGGTGCAACAAATGATAGCCGGGAACCCTAATTGGTGGAACATCAATCATAATATGAGGCCTCCTATTTCTCATCAACAACCACCTTCTTCTTCTCCTTTCTTCTTTTCTCCTTCTTCCAATAACTTCCTCTCTCCACATCCTCCTTCATCTCCTCTTCCCTTTCCTTCTAATTGGCATGCAAATCAAGATCAGCTTCCTGAGTCCTGGAGCCAACTTCTCATGGGTGAAGAAGATAAGAAACTGGGAAACTGGGAGGAGCAAGTGCTGATGAGTCAGGCACAAAATGTTGCTCTTGTGGATGTGAAGCAAGAGAGCTCATCGGTGAATAGTTATGTGTATGGAGGAGGACATGGCGGCGGTTCTGGCGGCAGCGGCAATAACAGTAACGAAGAGTTTCAGGCGGCTTCCGGTGGCCGAGGTGGCGCTGCTAATTGGTCTCATCATCATCAAATAGTGCCTCCTCCTCATCCTCCAGCTGCTTCTTCTTCTTCACCAAAATCCTGTGTCACAACTTTCAGCAGCAACATGCTGGATTTCTCTAGCAGTAAGACAGATGCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTATAACAGCAATGGAGGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACACAGTCTTCTACCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACTGCCCTTCATCAGTTAGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCAATAGGATACATCAGATTCCTCCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACCACTGGATCATCATCATCAAACATGAGGCAGCAACACTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACTCTGGTCAGGAATTACAGGAGGAAGCAAAGAAGGACCTGAAGAGCAGAGGGTTGTGTTTGGTTCCAGTGTCATGCACACTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCAGCTCTTGGAGGAGGCTTTCGATGA 1074 0.4674 MNRGVVQSSPVQQMIAGNPNWWNINHNMRPPISHQQPPSSSPFFFSPSSNNFLSPHPPSSPLPFPSNWHANQDQLPESWSQLLMGEEDKKLGNWEEQVLMSQAQNVALVDVKQESSSVNSYVYGGGHGGGSGGSGNNSNEEFQAASGGRGGAANWSHHHQIVPPPHPPAASSSSPKSCVTTFSSNMLDFSSSKTDARHPPPDRSSEYNSNGGGGAVKKARVQPSTTQSSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTTGSSSSNMRQQHSVQGEKNCIFPEDSGQELQEEAKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5302g00001 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 282 IPR036638 GO:0046983
Pral5302g00001 357 MobiDBLite consensus disorder prediction 172 192 - -
Pral5302g00001 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 222 271 IPR011598 GO:0046983
Pral5302g00001 357 MobiDBLite consensus disorder prediction 129 232 - -
Pral5302g00001 357 FunFam transcription factor bHLH68 isoform X1 229 282 - -
Pral5302g00001 357 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 64 339 - -
Pral5302g00001 357 CDD bHLH_AtbHLH_like 227 279 IPR045239 -
Pral5302g00001 357 Gene3D - 221 282 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5302g00001 Pral-Chr5302 17866 22073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5302g00001 1 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.147 1.57e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5302g00001 - - pcin:129293482 457.603