Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5300g00056 ATGAAGAAAATCATGATTGAGAAACAACCATCTCTCGAGAATTTTAATGATGCGTCAAGCAGCACTGGCCTCTCCTCAGATGACAAGGAGATTGACTGCACCAATGCAATATCAAAGCAGCAATACATCTTGGTGAAAAACTCTGCTTTTCATAGTTCGCTCATCAGACTTGACCTAAATTATGCTCGCACGGCCGTGGCAGAGATGGTGGGTACTTTCATTCTCATGTTCTGTGTATGTGGAATCATTGCAAGCACGCAGTCGCAGAATGGAGAAGTGGGCCTCCTGGAGTATGCAGCTACGGCAGGATTAACAGTGGTTGTTGTAATCTTCTCAATTGGGCCAATCTCTTGTGCTCATGTTAACCCGGCCGCCACAATAGCTTTTGCAACGTTTGGTCAATTTCCATGGCTGAAGGTTCCAGTTTACATACTAGCACAAACAGTGGGTTCTGTGTTGGCAACATATATTGGCAGCCTCGTCTATGGGATTAAATCAGAAGCCATGATGACAAGGCCAATCCAAGGGCCTGTCTCAGCCTTCTGGGTGGAGCTGATTGCAACTTTCATCATAATGTTCCTTGCTGCAGCCCTGACAAGTGAATTTCAATCAGTGGGTCATTTATCCGGTTTTGTTGTTGGAATTGCCATTGGACTTGCAGTGTTGATCACCGGACCTGTTTCGGGGGGATCAATGAATCCTGCAAGATCATTAGGCCCCGCAATCCTGTCATGGAAATTCAAGGACATATGGATATACATCACAGCCCCCATAAGTGGAGCTGTGGCAGATTGTGAACGAAATGTGAAGCAACTGAAAAACACACTCGCAATTTGCGACAGTGATGGATGA 852 0.4566 MKKIMIEKQPSLENFNDASSSTGLSSDDKEIDCTNAISKQQYILVKNSAFHSSLIRLDLNYARTAVAEMVGTFILMFCVCGIIASTQSQNGEVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFATFGQFPWLKVPVYILAQTVGSVLATYIGSLVYGIKSEAMMTRPIQGPVSAFWVELIATFIIMFLAAALTSEFQSVGHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKDIWIYITAPISGAVADCERNVKQLKNTLAICDSDG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5300g00056 283 Pfam Major intrinsic protein 61 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5300g00056 283 PANTHER AQUAPORIN NIP2-1 40 263 IPR034294 -
Pral5300g00056 283 SUPERFAMILY Aquaporin-like 58 262 IPR023271 -
Pral5300g00056 283 Gene3D Glycerol uptake facilitator protein. 19 266 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5300g00056 Pral-Chr5300 335379 338362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5300g00056 66 263 Major Intrinsic Protein MIP AT5G37810 41.709 3.13e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5300g00056 K09874 - qsa:O6P43_021616 373.629