Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5300g00041 ATGGCAATTGTAGACAGCATTGTCAGTCTCTTTCTTCTCACTATGCTCATTCTCATCGTCGTCCTTGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGGCCCCGTTCCTCCATCAAGGGTAATGAACTTGAGAGGCCTCTTGTCTTAGATGATGCAAATTTGGTGCATAACCCAAGTAGTGAATTGCCTATAGACTATGATCTTGAGGGTGCATCCATCCCCAATGAAGGTTATTTTCGCCCACCGCGACCCCCTGGACTTATTTATAAGCAAAGGCTTTCTGCTGCTTCTTGCCACATGCCTCAAGATGTAGTTTCTGTTCCCTCAGAAGACGTTGCTGTTGGCCAGACACTTAAACTGTCCCCAGCCCAGTTTGCAGAGTTTCAGAAGCATAATAAAAATTTTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATAATAGATCAAAGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTCGTGGACTCCGTTGTTCTGTACAATCAGCAATTCCATCCAAGCTACCGCTGACCCTGGGAAGAGTTTCCCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCCCTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGGACACTTTTGAATTCTCAACCAATCAAACATTTAGACCCCGGAAGCAGGCAATGGAGTAATCCAATTGAGCTTGCTAATGGAGATATCATAACACTGGGAATGACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGAGGGAAAAAGCTGGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACTTGGGTTAGATAAGTTTGGTCTGTTTGGCGTTTGTGATGGGCATGGTGGAGATGGGGCTGCCAGATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAAAGAGAGAAGGTTGTATCACTCTGTGATGCTTCAGATGTTCTAAGGGATGCATTTTCTCAAACAGAAGCTTGCATGAATCACTATTATGAGGGATGTACAGCTACAGTGCTTCTAGTTTGGGGTGATGGCAATGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGCGTTATGAATGTTGATGATAAAGAAATTAGGATGACGGAAGATCATAAGGTGACAAGTTGTTCTGAAAGGCTACGAATTGAAGAGACAGGCGAACCTCTGAGAGATGGGGAAACACGTCTATATGGTATAAATCTTGCGAGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTGCACATTGATCAGGCAAGCAGGGCTTTTGCCATACTAGCAAGTGATGGGCTATGGGATGTCATGAGCGGGAAGAAAGCAATTCAGCTAGTGCTTCAGATGAGAGACAAGTACTCGACAGATGATGATAATTCAGCGGAAAAGATTGCAAATTTGCTGTTGAGTGAGGCTAGAACACTCAGAACAAAGGATAACACCTCAGTAATTTTCTTAGGTTTTGATACCTTATCCAGATTCTCTTATAAAGCTGAGTGTTAA 1698 0.4229 MAIVDSIVSLFLLTMLILIVVLVFFACKPWRFLFSSRPRSSIKGNELERPLVLDDANLVHNPSSELPIDYDLEGASIPNEGYFRPPRPPGLIYKQRLSAASCHMPQDVVSVPSEDVAVGQTLKLSPAQFAEFQKHNKNFETDRLQDFVQRDIIDQRSCLTLEVITGPSRGLRCSVQSAIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPIKHLDPGSRQWSNPIELANGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLLGLDKFGLFGVCDGHGGDGAARSASKLFPEIVANILSDSLKREKVVSLCDASDVLRDAFSQTEACMNHYYEGCTATVLLVWGDGNENFFAQCANVGDSACVMNVDDKEIRMTEDHKVTSCSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAILASDGLWDVMSGKKAIQLVLQMRDKYSTDDDNSAEKIANLLLSEARTLRTKDNTSVIFLGFDTLSRFSYKAEC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5300g00041 565 FunFam Protein phosphatase 2C 70 154 288 - -
Pral5300g00041 565 FunFam Protein phosphatase 2C 70 289 560 - -
Pral5300g00041 565 Gene3D - 289 562 IPR036457 -
Pral5300g00041 565 Gene3D - 153 288 - -
Pral5300g00041 565 Pfam FHA domain 186 261 IPR000253 GO:0005515
Pral5300g00041 565 CDD FHA_PP2C70-like 159 269 - -
Pral5300g00041 565 ProSitePatterns PPM-type phosphatase domain signature. 318 326 IPR000222 GO:0043169
Pral5300g00041 565 ProSiteProfiles Forkhead-associated (FHA) domain profile. 185 236 IPR000253 GO:0005515
Pral5300g00041 565 SMART PP2C_4 275 551 IPR001932 -
Pral5300g00041 565 CDD PP2Cc 293 553 IPR001932 -
Pral5300g00041 565 SUPERFAMILY SMAD/FHA domain 157 267 IPR008984 GO:0005515
Pral5300g00041 565 Pfam Protein phosphatase 2C 291 546 IPR001932 -
Pral5300g00041 565 SMART FHA_2 184 236 IPR000253 GO:0005515
Pral5300g00041 565 SUPERFAMILY PP2C-like 294 554 IPR036457 -
Pral5300g00041 565 PANTHER PROTEIN PHOSPHATASE 2C 275 549 IPR015655 GO:0004722|GO:0006470
Pral5300g00041 565 ProSiteProfiles PPM-type phosphatase domain profile. 281 553 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5300g00041 Pral-Chr5300 244629 251248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5300g00041 1 555 PP2C-type Phosphatase Gene Family AT5G19280 59.222 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5300g00041 K01090 - qsa:O6P43_003406 812.372