Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5300g00038 ATGGCAATTGTAGACAGCATTGTCAGTCTCTTTCTTCTCACTATGCTCATTCTCATCGTCGTCCTTGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGGCCCCGTTCCTCCATCAAGGGTAATGAACTTGAGAGGCCTCTTGTCTTAGATGATGCAAATTTGGTGCATAACCCAAGTAGTGAATTGCCTATAGACTATGATCTTGAGGGTGCATCCATCCCCAATGAAGGTTATTTTCGCCCACCGCGACCCCCTGGACTTATTTATAAGCAAAGGCTTTCTGCTGCTTCTTGCCACATGCCTCAAGATGTAGTTTCTGTTCCCTCAGAAGACGTTGCTGTTGGCCAGACACTTAAACTGTCCCCAGCCCAGTTTGCAGAGTTTCAGAAGCATAATAAAAATTTTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATAATAGATCAAAGTGCAGGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTCGTGGACTCCGTTGTTCTGTACAATCAGCAATTCCATCCAAGCTACCGCTGACCCTGGGAAGAGTTTCCCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCCCTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGGACACTTTTGAATTCTCAACCAATCAAACATTTAGACCCCGGAAGCAGGCAATGGAGTAATCCAATTGAGCTTGCTAATGGAGATATCATAACACTGGGAATGACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGAGGGAAAAAGCTGGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACTTGGGTTAGATAAGGTTCTGGATTTATACACAGTGCTTGTTCTGTCAAGCTTGCAGTTTGGTCTGTTTGGCGTTTGTGATGGGCATGGTGGAGATGGGGCTGCCAGATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAAAGAGAGAAGGTTGTATCACTCTGTGATGCTTCAGATGTTCTAAGGGATGCATTTTCTCAAACAGAAGCTTGCATGAATCACTATTATGAGGGATGTACAGCTACAGTGCTTCTAGTTTGGGGTGATGGCAATGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGCGTTATGAATGTTGATGATAAAGAAATTAGGATGACGGAAGATCATAAGGTGACAAGTTGTTCTGAAAGGCTACGAATTGAAGAGACAGGCGAACCTCTGAGAGATGGGGAAACACGTCTATATGGTATAAATCTTGCGAGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTGCACATTGATCAGGCAAGCAGGGCTTTTGCCATACTAGCAAGTGATGGGCTATGGGATGTCATGAGCGGGAAGAAAGCAATTCAGCTAGTGCTTCAGATGAGAGACAAGTACTCGACAGATGATGATAATTCAGCGGAAAAGATTGCAAATTTGCTGTTGAGTGAGGCTAGAACACTCAGAACAAAGGATAACACCTCAGAAATGGTATATGTGGTGCTTTCCTCAGATCGCCTTCCTTTTTCTGTGTCGTCTCATGCTCAATCTGCGGAATCAATAATTCTTCGCCAATTACTTCTCCTGCCCTCTTTTCTTTTTCTCCTCCTCGTCCTTCGCCATTTCAGATGTTTGACATTTCGGTTTTAA 1854 0.4277 MAIVDSIVSLFLLTMLILIVVLVFFACKPWRFLFSSRPRSSIKGNELERPLVLDDANLVHNPSSELPIDYDLEGASIPNEGYFRPPRPPGLIYKQRLSAASCHMPQDVVSVPSEDVAVGQTLKLSPAQFAEFQKHNKNFETDRLQDFVQRDIIDQSAGSCLTLEVITGPSRGLRCSVQSAIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPIKHLDPGSRQWSNPIELANGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLLGLDKVLDLYTVLVLSSLQFGLFGVCDGHGGDGAARSASKLFPEIVANILSDSLKREKVVSLCDASDVLRDAFSQTEACMNHYYEGCTATVLLVWGDGNENFFAQCANVGDSACVMNVDDKEIRMTEDHKVTSCSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAILASDGLWDVMSGKKAIQLVLQMRDKYSTDDDNSAEKIANLLLSEARTLRTKDNTSEMVYVVLSSDRLPFSVSSHAQSAESIILRQLLLLPSFLFLLLVLRHFRCLTFRF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5300g00038 617 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
Pral5300g00038 617 ProSiteProfiles PPM-type phosphatase domain profile. 283 569 IPR001932 -
Pral5300g00038 617 FunFam Protein phosphatase 2C 70 291 575 - -
Pral5300g00038 617 Gene3D - 155 291 - -
Pral5300g00038 617 CDD PP2Cc 295 566 IPR001932 -
Pral5300g00038 617 SMART FHA_2 186 238 IPR000253 GO:0005515
Pral5300g00038 617 Pfam FHA domain 188 263 IPR000253 GO:0005515
Pral5300g00038 617 FunFam Protein phosphatase 2C 70 156 290 - -
Pral5300g00038 617 SUPERFAMILY PP2C-like 297 566 IPR036457 -
Pral5300g00038 617 SUPERFAMILY SMAD/FHA domain 160 269 IPR008984 GO:0005515
Pral5300g00038 617 PANTHER PROTEIN PHOSPHATASE 2C 277 566 IPR015655 GO:0004722|GO:0006470
Pral5300g00038 617 CDD FHA_PP2C70-like 161 271 - -
Pral5300g00038 617 ProSiteProfiles Forkhead-associated (FHA) domain profile. 187 238 IPR000253 GO:0005515
Pral5300g00038 617 SMART PP2C_4 277 567 IPR001932 -
Pral5300g00038 617 Gene3D - 292 574 IPR036457 -
Pral5300g00038 617 Pfam Protein phosphatase 2C 330 562 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5300g00038 Pral-Chr5300 244472 251251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5300g00038 1 568 PP2C-type Phosphatase Gene Family AT5G19280 57.119 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5300g00038 K01090 - qsa:O6P43_003406 776.548