Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5300g00008 ATGGCTTCCTCTGTAATCCTACTTTGCATTATTGCGCTAGTTTCATTATTAACCGTCTTACATGCCCAGAATTCTTCCTCCACCATAAATTTGAACTCCAACATCACTGCTGGATCAAATTCTTCTTGGAAATCTCCATCAGGTGATTTTGAATTTGGATTCTACCATCTTCCCGGGGATTACTATCTGGTCGGAATATGGTTTGCTATCCCTGAGAAAACTCTGGTTTGGTACTGGAACCCACCTGTGGAAACCAATTCAGTGATCCAACTCTCTTCGGGAGGCCACCTTTTGCTCATATATCCAAATGGAACCTCTGTTCGGATAGACAATGGAAATGGAGATAATGCAAGCTCAGCTTCCTTGGAGAACAATGGCAATTTTGTATTGAAAGACTCCAATTCAAGACCTGTCTGGAAGAGTTTTGATTCTCCCACTAACACAATGCTACCGGGGCAAGTCTTAAATGCGAATGGTGCACTCTATGCCAAAGGCAAAGGACCTCTGAACTACTCAAATGGAAACTTCAAGGTATTGATGCAAGACGATGGGAACTTGCTACTCTCTGCTTATCTATGGTCAGATCCTGCTTATTGGTACTCTGCAACAACATCATTCAAAAACGTAAGTTTGGTATTCAATCTTAGTGCCTTCTTGTACCTTACCAGTGGCTCCATCAACATACGTTTTTTGACAAATAACCCTCCATCCCCAACTGAAGATTTTTATCACCGAGCAACAATAGATGAAAATGGAAATTTTCATCAATATGCTTATAATCGGAGAAATGGCAGTAGGTGGATAAGGGTCTGGAGAGCCATTGATGATCCTTGCAGAGTGGATGCTATTTGTGGAGTGAATGGCTTGTGCACTTCACCTGACAATGAAACAGTGCAGTGTGAATGCCTTCCAGGTTTTGTCCCATTTAATATGACAAATGAATACCTAGGATGTCGCCCAGAAACTGTGATTAATTATTGTGCACAAGATCCTTCTAGGTTGAACTTCAAGCTGGAGGTTTTTGATGATACTGATTTTCAGTTTGACTCCTTGTCAGACTTTGCTGAGCTGAAAACTGCAGATTTAGAAGCTTGTGAGAAGTATGTCATGGATGATTGTAATGTCGTTGCTGCTACCTTCAATGCTACATCTTCAACATGTATCAAGAAGAGGATGCCGTTGGTGAATGCGAGAAAGAGTTCATCTTCTAAGGGGCAAAAAGCTCTACTTAAGGTTCCTACTTACAACAACGCCTCTGGAGGATTGGAAGGTTCGAAGAAGAAGAGTTTTAATGTCAGAGTTTTTCTCAAGGTCATGCTTGCTGTTAGTTCCACCCTTGCATGCTTGTTTGGAGCCCTTGCTGTCTATTACCACCCTTTAGCTCAAAGACTAATGAGACGAAGCAAGTTTCTGAACGCAAGTGCCATTGGAATCAACTTCAGAGAGTTCACATTCCAAGAGCTTCATGAAGCAACAGGTGGATTCAATAAGACTATTGGTAAAGGATCTTCGGCCAAAGTCTATAGTGGAAATCTTGTTATTGATGATTCGACAATTGCGATTGCAGTGAAGAAGCTAGAAAAGAAAGTTGAGACAAGTGATCAGGAATTTATGACTGAGCTCAAAATAATTGGTCGCACACATCACAGAAACCTGGTAAGACTTCTGGGTTTTTGCATTGAGAAGAGCCATAGACTTCTTGTCTATGAGTTACTTCCAAGTGGAGCGTTGTCCAATTTTCTGTTTGGACAAAGAGAAAAACCTCCTTGGAGTCTAAGGATTGATATAGCTCTTGGGATTGCAAGGGGCTTGCTTTACTTGCATGAGGAGTGTGAGACCCAGATTATACATTGCGACATCAAGCCCCAAAACGTGTTACTGGATGCCGATTATACGGCGAAGATTGCAGATTTTGGGCTGTCCAAGCTTCTCAACAAAGAGCAAACCAGAACAAACACTAACTTCAGGGGGACTATAGGGTACATAGCCCCTGAATGGCTAAGAAGTGCACCTGTAACTGCTAAAGTTGATGTCTTTAGCTTTGGGATTATGTTGCTCGAGATTATTTGTTGCAAAAGGCATGTCGAACAGAATCAAGCAGATGATGAAGAAAGTGATGAAGATGATGATGCATTGCTGGCAAAATGGGTTCTGAAGTGCATCGTGTTGAAGAAACCGGAGCAGTTTGCAGGTCATGACTCAGAAGTACTAAGTGATATGACAAGGTTTGAGGAAATGGCCTTGGTTGGATTATGGTGTATCCATCCAGATCCAGCACTGAGACCAACAATGAAGCAGGTGAATCAAATGCTAGAGGGAAACATGGCTGTTGGGGTTCCTCCATTGCTTTATGAGCAAATGACAGCAGATCTAAGCATATAG 2382 0.4198 MASSVILLCIIALVSLLTVLHAQNSSSTINLNSNITAGSNSSWKSPSGDFEFGFYHLPGDYYLVGIWFAIPEKTLVWYWNPPVETNSVIQLSSGGHLLLIYPNGTSVRIDNGNGDNASSASLENNGNFVLKDSNSRPVWKSFDSPTNTMLPGQVLNANGALYAKGKGPLNYSNGNFKVLMQDDGNLLLSAYLWSDPAYWYSATTSFKNVSLVFNLSAFLYLTSGSINIRFLTNNPPSPTEDFYHRATIDENGNFHQYAYNRRNGSRWIRVWRAIDDPCRVDAICGVNGLCTSPDNETVQCECLPGFVPFNMTNEYLGCRPETVINYCAQDPSRLNFKLEVFDDTDFQFDSLSDFAELKTADLEACEKYVMDDCNVVAATFNATSSTCIKKRMPLVNARKSSSSKGQKALLKVPTYNNASGGLEGSKKKSFNVRVFLKVMLAVSSTLACLFGALAVYYHPLAQRLMRRSKFLNASAIGINFREFTFQELHEATGGFNKTIGKGSSAKVYSGNLVIDDSTIAIAVKKLEKKVETSDQEFMTELKIIGRTHHRNLVRLLGFCIEKSHRLLVYELLPSGALSNFLFGQREKPPWSLRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDADYTAKIADFGLSKLLNKEQTRTNTNFRGTIGYIAPEWLRSAPVTAKVDVFSFGIMLLEIICCKRHVEQNQADDEESDEDDDALLAKWVLKCIVLKKPEQFAGHDSEVLSDMTRFEEMALVGLWCIHPDPALRPTMKQVNQMLEGNMAVGVPPLLYEQMTADLSI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5300g00008 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 778 - -
Pral5300g00008 793 ProSiteProfiles Protein kinase domain profile. 493 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5300g00008 793 SUPERFAMILY Protein kinase-like (PK-like) 480 781 IPR011009 -
Pral5300g00008 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 781 - -
Pral5300g00008 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 203 IPR036426 -
Pral5300g00008 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pral5300g00008 793 PIRSF SRK 1 790 IPR024171 GO:0004674
Pral5300g00008 793 Gene3D Transferase(Phosphotransferase) domain 1 572 780 - -
Pral5300g00008 793 Gene3D - 21 144 IPR036426 -
Pral5300g00008 793 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Pral5300g00008 793 Pfam D-mannose binding lectin 74 158 IPR001480 -
Pral5300g00008 793 FunFam S-receptor-like serine/threonine-protein kinase 462 571 - -
Pral5300g00008 793 CDD B_lectin 45 145 IPR001480 -
Pral5300g00008 793 ProSiteProfiles Bulb-type lectin domain profile. 28 143 IPR001480 -
Pral5300g00008 793 SMART serkin_6 493 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5300g00008 793 ProSitePatterns Protein kinases ATP-binding region signature. 499 525 IPR017441 GO:0005524
Pral5300g00008 793 CDD STKc_IRAK 499 773 - -
Pral5300g00008 793 SMART blect_4 34 145 IPR001480 -
Pral5300g00008 793 Gene3D - 146 282 - -
Pral5300g00008 793 Pfam S-locus glycoprotein domain 240 308 IPR000858 GO:0048544
Pral5300g00008 793 Pfam Protein kinase domain 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5300g00008 Pral-Chr5300 45729 48261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5300g00008 438 781 Receptor kinase-like Gene Family AT3G53380 38.728 2.77e-66 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5300g00008 Pkinase 6.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5300g00008 - - lang:109330973 1077.39