Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5300g00007 ATGGATGTTCATGTTCCCACTAAACTCCTTGCGCTCTGTGTCCCTTTTTTCCTGTTTCTTCTATGCTCTAATGCTCAGACGAGCTCAAATTCTATCCAACTGGGCTCAAGCATCGTTGCTGGCTCTAATAAATCTTGGACATCACCTTCTGCTGATTTTGCTTTTGGGTTCTACCCTCTCCCCCATGGTCGCTACCTTGTGGGTATTTGGTTCGATAAGATTAATCCCCAGAAAACTCTGGTCTGGTCCGCAAATCGTGATGACCCGGCTCAGATTGGATCCACCATCAATCTCACACTCAGTGGCCAGTTAGTGCTGCTTCATGCCAATGGTTCGTTAGTTTCCATCTACAATCAAACAAATAATGCTTCTTCTGCTTCAATGCTGGATAATGGAAACTTTGTCCTGAAAAACTCACTCTCAAACATCATCTGGGAGAGCTTTGCTTCACCCACAGATACCATTCTACCAGGCCAAAACTTGGTCATGAGTCAGATTCTTTATTCAAATGCCAATGGAACACTAGACTACTCGACGGGGAATTACAAGTTGGAGGTCCAATCTGATGGAAACATTGTTATCGCTGCTTTCAGGTATTCCGGTCATGCTTATTGGTTCACTGGAACAATCGAAAACAATAGCGTCAGCATCGTCTTCGACAACAATACAGCTATGCTTTACGCCGTCAATGGCACCCGAAACATTTACCAAATGACAACCCAAAGCCAGCTGCCCAACCCAATCGAAGATTTCTACCATCGAGCGACAATCAACGATCATGGTAACTTCGAACAGTTGATTTTTCATAAAAAAAACGGAACAGAGTGGACGCTTATATGGGATGCTATAACAGAGCCCTGCTTAGTGGATGCTATTTGTGGGGTAAATGGCTTTTGCACTTCACCTGACAACAAGGTGATCAATTGTAGCTGCTTGCCTGGGTATACACCTTTGGATCCTTATGTTCCCTCCAAAGGCTGTTATCGTAATTTGGAGATGGATTTTTGCGCTGCAAATTCATCTGCCTCGGACTTCACTGTGCAAGAAATTTCAGATGCTGATATACCCAACTTGAATTTTGCTGATATGCAGTGGATACCTAATTCAGATTTGATTAGTTGCACGAGGGAAGTGATGAGTGATTGTTTTTGCATGGCTGGTGTTTTGATTGGCACTGATTGTTTCAAGAAAAGGACACCTCTTTTGAATGGAAGAATAAGCATCCCGACGACCAGTAAAAGGGTGGCGCTAGTTAAAGTTCCTGTGGTTCGCAAAGATGATGGAAATGACTCACCTTCTTGGATTGTTCTGCTTGTATCATTCATATCTTGTTCCCTGCTCGCTCTTGTTTTTGCAGCTTCTGCTGTTCATCATAACCCAAAGTTTCGCCGTTGGATACGTAAGGAGCCACCTCCCAACCCAAAGCCAGTGGACATAAATCTAAAGACGTTTTCATTTCAAGAGTTGAGAGAGGCAACAAAGGGGTTCAAGAACAAACTTGGTCGAGGAGCATTTGGCACTGTGTATAGTGGGATTTTGACGTTGGAGGGCGAACAGGTTGAGGTTGCCGTGAAACAACTGGAAAAAGCAGAGGATCAGGATGAGATTCGTGAGAAGGAGTTTGTGACCGAAGTTCAAGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGGTTATTAGGCTTCTGTAATGAACGAAATCATCGTCTCCTAGTTTACGAGATGATGAAAAATGGGTCGCTCTCCAGTTTACTTTTTGGGGAAGGGGATAAACCCAGATGGGAAGACAGAGCCAAGATTGCGCTTGAAGTTGCAAGGGGCTTGCTATATTTGCATGAAGAATGTGACCCACAAATCATCCATTGCGACATAAAGCCACAGAATGTTCTTCTTGACTCCAATTATACGGCAAAAGTTTCTGATTTCGGCGTTGCAAAGCTGCTAAAGAAAGACAGAACTCGAACCAGCACCAACGTCAGAGGGACAATGGGATATATGGCACCAGAATGGCTCAAGAATGCTCCCGTCACGGCAAAGGTTGATGTGTATAGCTTTGGGGTCATGTTGTTGGAGACCATATTCTGCAGAAGGCACATAGAGCTACATCCGAGTCAAGATGAAGGAGAGGGTGAGGACATGATACTCATAGATTGGGTTTTATATTCAGCAAAAGAAGGAAATTTAAGAGTGATGGTGGATCACGATGTTGAAGCTCTAAATGATTTCAATAGGTTTGAGAGGATGACTATGGTTGGATTGTGGTGCCTGTCTCCTAATCCAGCGGTTCGGCCAACTATGAAGAAGGTGACACAGATGTTGGAAGGAGCCATGGAGGTTGGTGTTCCTCCTTTGATTGATGCACAAATGTGA 2370 0.4405 MDVHVPTKLLALCVPFFLFLLCSNAQTSSNSIQLGSSIVAGSNKSWTSPSADFAFGFYPLPHGRYLVGIWFDKINPQKTLVWSANRDDPAQIGSTINLTLSGQLVLLHANGSLVSIYNQTNNASSASMLDNGNFVLKNSLSNIIWESFASPTDTILPGQNLVMSQILYSNANGTLDYSTGNYKLEVQSDGNIVIAAFRYSGHAYWFTGTIENNSVSIVFDNNTAMLYAVNGTRNIYQMTTQSQLPNPIEDFYHRATINDHGNFEQLIFHKKNGTEWTLIWDAITEPCLVDAICGVNGFCTSPDNKVINCSCLPGYTPLDPYVPSKGCYRNLEMDFCAANSSASDFTVQEISDADIPNLNFADMQWIPNSDLISCTREVMSDCFCMAGVLIGTDCFKKRTPLLNGRISIPTTSKRVALVKVPVVRKDDGNDSPSWIVLLVSFISCSLLALVFAASAVHHNPKFRRWIRKEPPPNPKPVDINLKTFSFQELREATKGFKNKLGRGAFGTVYSGILTLEGEQVEVAVKQLEKAEDQDEIREKEFVTEVQVIGLTHHRNLVRLLGFCNERNHRLLVYEMMKNGSLSSLLFGEGDKPRWEDRAKIALEVARGLLYLHEECDPQIIHCDIKPQNVLLDSNYTAKVSDFGVAKLLKKDRTRTSTNVRGTMGYMAPEWLKNAPVTAKVDVYSFGVMLLETIFCRRHIELHPSQDEGEGEDMILIDWVLYSAKEGNLRVMVDHDVEALNDFNRFERMTMVGLWCLSPNPAVRPTMKKVTQMLEGAMEVGVPPLIDAQM 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5300g00007 789 Gene3D Phosphorylase Kinase; domain 1 472 575 - -
Pral5300g00007 789 Pfam D-mannose binding lectin 79 165 IPR001480 -
Pral5300g00007 789 FunFam S-receptor-like serine/threonine-protein kinase 466 575 - -
Pral5300g00007 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 210 IPR036426 -
Pral5300g00007 789 PIRSF SRK 2 788 IPR024171 GO:0004674
Pral5300g00007 789 SMART blect_4 37 151 IPR001480 -
Pral5300g00007 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 149 - -
Pral5300g00007 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 781 - -
Pral5300g00007 789 CDD B_lectin 41 151 IPR001480 -
Pral5300g00007 789 Pfam Protein kinase domain 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5300g00007 789 ProSiteProfiles Protein kinase domain profile. 494 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5300g00007 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral5300g00007 789 ProSitePatterns Protein kinases ATP-binding region signature. 500 525 IPR017441 GO:0005524
Pral5300g00007 789 Gene3D - 149 243 IPR036426 -
Pral5300g00007 789 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Pral5300g00007 789 Gene3D Transferase(Phosphotransferase) domain 1 576 780 - -
Pral5300g00007 789 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Pral5300g00007 789 SUPERFAMILY Protein kinase-like (PK-like) 473 774 IPR011009 -
Pral5300g00007 789 Gene3D - 23 148 IPR036426 -
Pral5300g00007 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 783 - -
Pral5300g00007 789 SMART serkin_6 494 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5300g00007 789 CDD STKc_IRAK 500 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5300g00007 Pral-Chr5300 41871 44643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5300g00007 482 783 Receptor kinase-like Gene Family AT3G53380 41.639 7.10e-69 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5300g00007 Pkinase 9.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5300g00007 - - aprc:113871840 1028.47