Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5299g00009 ATGACTGGCGTTGGAAATACACTCAAAAGGCATTATGAAACTTACCTTCTAGAATATGAATTAGCACATGATGATGTGGATGGAGAGTGCTGCTTGTTGTGTCACAGTAGTGCAGCTGGGGATTGGGTGAATTGTGGCATATGTGGCGAGTGGGCCCACTTCGGCTGTGACAGACGGCAAGGTCTTGGCGCATTTAAGGATTATGCAAAAACAGATGGACTGGAATATATTTGTCCTCATTGTAGCGTAACAAATTTCAAGAAGAAACCCTCAGGCGTTGCCAATGGGTTTTCTCAGGGGTCAACGGCATCAAAACCCTTTTGA 324 0.4506 MTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKPSGVANGFSQGSTASKPF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5299g00009 107 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 1 103 IPR042293 -
Pral5299g00009 107 SUPERFAMILY FYVE/PHD zinc finger 11 84 IPR011011 -
Pral5299g00009 107 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 89 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5299g00009 Pral-Chr5299 54015 56079 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5299g00009 1 96 ARID Transcription Factor Family AT3G43240 83.333 1.07e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5299g00009 - - mdm:103403134 227.254