Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5298g00004 ATGCGTTTTCTTTTGATTGACATATATGCCAGGCCTGAATTCAAACTTATTGAAGAGATTGTCAAGGATGTTTTGAGGAAGTTGAACTATGCATCATCATCTCATCTTGAAGGACTCATTGGCATTGCTCGACATGTTAAAAACATTCAGAGGCTTCTAATTGAGGCCCGTATTGTGGGAATATGGGGTATGGGCGGTGCTGGTAAGACCACACTTGCTAAAGCTATATTTCAGGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAAAGCAATTAAAAAGAATTAGTTTGGATGAGCTGCAGAAGAATTGCCTTAAAGAATTATTAAAAGATGAGGATATTAGCATCTATGAAATAAAATCCACTTTTGTGAAAAATAGGCTTCAAAGAAAAAAAATTCTTCTTATACTTGATGATGTGGACAATTCAATAGTAGCGGCAGATTTAACCAGGGTACTTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTAAAGAATGCTTCTGCGACATTTTCAAAATATCACGTTTCGGATTTGGATTTTGAAGATGCTTTTCATCTCTTCAATTTGAAAGCATTCAAGCGAGATGAGCCATCTAAAGGTTACATGGAGTTATCAAAATCTGTAGTGAAATATTGTCACGGAAACCCATTAGCCCTAGTAGTGCTGGGTTGCTTCCTTTATGGCAGACAAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAGTCAAGCTCCACCCAAGGACATTGTTGATGTTCTGAAGTTGAGTTTTGATGGACTTGATGACAAACAGCAAAATGTGTTCCTTGACCTGGCATTCTTAATCAAGCAAGGAGTTCATATTTCTTTGAACCTATTGAGACAATTATATTGTTCTTCTATGCATATTGAGATAAGTGTTCTAAGAGAAAAGTCCCTCATTTCATTTAATGATCATAATGATTTCATTGAGATGCATGATCTTCTGAGGGAAATGGGCCTTGAAATTTCAAGCCAACAATTATTCTCTGGTCGTAAAACACATGTTCGACTATGGAGGCATGAGGACATTTATCACTTTTTCCACAATGACCAGGCGATTGAGGCAATTCGATGCATGTCCTTGGATGCAAGCAAGATAGAAAGCATTACATTGATGGCTAGTCATTTTCGAAGAATGCATTATTTAATGTCCCTTCAAGTTTACAAGTCAGATCGGGGAAAGCCTTCAAAGTTGAATATTTGTGAACCGTTGGATTATCTTTCTAAAGAATTAAGGTTTCTTAGTTGGGAAGAATATCCATTGCCATTTGTGCCATTACAATTTTGTGCTGAGAATCTCATTAGACTTAATTTGCTTGACAGTAATATCCAACAGCTTTGGGATCAGAGCGAAGATGTCTACTTTGATATTATTGTGAGGGTGATGGGTAATAGAGGCAAAAGGGGTGTGCAAGATGATGAAGAAGACGATGAGGATGATAGAGAAATGATTAGTGAGAATGAAAGAGAAATGAGTAGTAAAGGTAATCAAGTAGTAGAAATGACATTATTATTGATGGAAGATGAACAAGAAGAGGCAGATGAGGATGATAGTAGGATGGACGATACATTATTAACAATACTACTTATTCCCAACACCATCCCTCGCTAG 1674 0.368 MRFLLIDIYARPEFKLIEEIVKDVLRKLNYASSSHLEGLIGIARHVKNIQRLLIEARIVGIWGMGGAGKTTLAKAIFQELKAQFDAFSFIENVKKQLKRISLDELQKNCLKELLKDEDISIYEIKSTFVKNRLQRKKILLILDDVDNSIVAADLTRVLDWFGEGSRIIITSRDMQVLKNASATFSKYHVSDLDFEDAFHLFNLKAFKRDEPSKGYMELSKSVVKYCHGNPLALVVLGCFLYGRQKEEWESALEKLSQAPPKDIVDVLKLSFDGLDDKQQNVFLDLAFLIKQGVHISLNLLRQLYCSSMHIEISVLREKSLISFNDHNDFIEMHDLLREMGLEISSQQLFSGRKTHVRLWRHEDIYHFFHNDQAIEAIRCMSLDASKIESITLMASHFRRMHYLMSLQVYKSDRGKPSKLNICEPLDYLSKELRFLSWEEYPLPFVPLQFCAENLIRLNLLDSNIQQLWDQSEDVYFDIIVRVMGNRGKRGVQDDEEDDEDDREMISENEREMSSKGNQVVEMTLLLMEDEQEEADEDDSRMDDTLLTILLIPNTIPR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5298g00004 557 SUPERFAMILY "Winged helix" DNA-binding domain 262 367 IPR036390 -
Pral5298g00004 557 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 499 IPR044974 GO:0006952
Pral5298g00004 557 PRINTS Disease resistance protein signature 58 73 - -
Pral5298g00004 557 PRINTS Disease resistance protein signature 226 240 - -
Pral5298g00004 557 PRINTS Disease resistance protein signature 132 146 - -
Pral5298g00004 557 MobiDBLite consensus disorder prediction 489 513 - -
Pral5298g00004 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 285 IPR027417 -
Pral5298g00004 557 Gene3D - 191 275 IPR042197 -
Pral5298g00004 557 FunFam Disease resistance protein (TIR-NBS-LRR class) 193 275 - -
Pral5298g00004 557 Pfam NB-ARC domain 47 259 IPR002182 GO:0043531
Pral5298g00004 557 Gene3D - 20 187 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5298g00004 Pral-Chr5298 57906 62041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5298g00004 40 474 WRKY Transcription Factor Family AT5G45050 33.189 2.02e-59 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5298g00004 - - pcin:129291819 653.284