Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5293g00006 ATGGAGTTTCTTGTGGCAATCGGGACAGGAATTGTGTCAAAACTTGGGGAGATGTTAATGGATCCACTCACATCGCAATTCAAACATCTGATTCACTATGACAAAAATATCAATAAAATGAAGAATGAACTCAACAACTTGGAAGAACGGAAGCGTGCTATTGAAGGAATGGTGGACGCAGACAGAAGGAATGGACGTCGCATTGCTCCAAATGTTGAACACTGGCTCTACAAAGTGGACAACGTTGTAGAAAATGAATTGCATAAAGTGTACGATGATGAGTTTGTCAACAAGAACAAGAAATGCCTCAATGGGTTGTGTCCAAATTTGGTGTTTCGTTATTCACTGAGCAAGAAAGCAGGAAAAATGGCGCCAGAACTTGTTTCCCTGAAGGAGCAAAAATTTGACTTCATATCCTACCCTGCACCTTTACCATCACTAGGATCCACTTTCACAGAAGGAATTAAGAGCTTTGCCTCAAGAGAATCAATTATTACCGAGGTTGTAGATAAATTGAAGGGTGATGAGTTCAACAGGATAAGCGTTTGTGGGATGGGTGGTGTGGGGAAAACCACATTAGTGAAAGAGCTCATCAAAATTTTAGAAGTAGATAAGGTGTTTGATGAAATTTCAATGGCTATCGTGTCCCAAGTTCCTGACTATAGAAAGATTCAAGGTCAAATTGGTGACACCTTAGGCTTGAAATTTGATAAGGAAACTCTACAAGGAAGGGCGGGCCAACTACTTGAGAGGCTTAACAAGATCAATAAGGTCCTCGTAGTGCTGGATGATGTATGGACAGAGCTGGATTTCGAGTTGATAGGGCTTCCTTCAAATGGGCAGTGTCACAAGGGCTGCAAAATTTTATTCACATCAAGAAATGAAGATGTGTGCCACAGGATGATAAGTCAGAGGAACTTCACTATGCCCGTTCTCTCTAAAGAAGAAGCATGGGATCTCTTCAGGGATACAGTAGGTGGTCATGTTGCGGACAGAGCTGAGATTCATAACATAGCAAAAGAGGTTGCAAATGAATGTAGGGGTTTGCCAATTGCTATTGTCACAATAGCAAAAGCACTAGGGAACAGGGAGAAGCATGCATGGGAGGATGCACTTGATCAGCTGAGAAAGTCTTCACTAACTTCCTTCTCAGAGATGCAAGAATATTCTATATATTCATGTATTGAATTAAGCTATAACTTTCTAGGCAACGAAGAAGCTAAATTTCTCCTTTTGCTTTGTTGCTTGTTCCCAGAAGACTTTGACATTCCTATTGAAGTTCTTCTAAGATATGGAGTGGGCTTGGGTTTGTTCAAGGATCTGGGTGCTTTGTGTAAAGCAAGGAATCGAGTGCATACCTTGGTTGATACTCTAAAGAAGCGGTTTTTGTTGCTGGACAGCAATGAGGAAGAGTGTGTGAAAATGCATGATGTCGTTCGTGATACTGTCATAACAATTGGATCCAAAGAAGAGCATGGATTTGCAGTGAAATATGATGCCGGACAGACGGGGTCAAAGGAGTTTATATGGCATCATAGTGCAATCTCACTTGTGTTTGATGGGATTAAGATGCATCCTAAGCGTTTGCAGTGTCCAAACCTTAGGCTTTTGCAACTTTATTTAAAGAGAAGAGAACCCATTTCCGAAAATTTCTTCCATAACATGAGCAAGCTAACGGTTTTAGGCATAAGCAATCTGTGCGTTCCATCAATGTCATCTCCATTCCGATCACTCAACAACCTCTGCACCTTACGGTTGGAAGATTGTCAGGTTGGAGACATATCGGTAATCTGTAAGGAGCTAAGGAAACTGGAAGTGTTAAGCTTTGCCCGCTCAAATATCAAAGAATTGCCAGCAGAAATAGGCAAGCTAAGCCTTCTAAGACTGTTGGATTTGACAGATTGCAATGATCTTGATCAGATGTCTTCCGGGGTCCTAGCTAGCTTATCTAACTTAGAAGAACTTTATCTTAGAGTCAGGAATTTCCATTGGCAGGAAAAGAATTCCATTCTTGCAGACCTCAAATCTCTTTCTCATCAGCTAAAAGTTCTTGAGATTTCAATAACAGGAATTCATAATTTTCCTAAAGATTTCGAGTTAAAAAGCTTGGTTAAGTTCTGGATCTATGTGAGAGACGCAACTACTCTTTCTCATGGCTTTGGTCGTCGAGGATATCTACATCCTAACATCCTTAAACTAAACAGTGTGTACCATAAGGACATTAAAGAGAATGTGGCAATTCAACAATTGCTTAAGAAATCTGAAATTCTCAACCTTGTGAATGTAAAACAATTAGAAAACTTGATCTGTGAGTTGGATGAAGAAGGTTTTCCGCACTTAAAAAATCTCAGCATTCAATTCTGCAACGAGCTGAAGTATTTAACAGATGAAACTGTCTATGCTTCAAGTTGTGTCTTCCCACTGGTTCAATCATTGTCTCTGCACAATTTGGACAATTTAAGGGAGATATGCCATGCCAAGACTTTCACCTCTAGTTGCCAATGCTTTGGCGGTTTGAGTGATCTGAAAGTAGAATTCTGCAACAAGTTGAAGTATATCTTTTCACCATCTCAGAAGTCAAGTGTTGGGATGCTCGAACGCTTGCATGTGACTGAATGCTATGGGATTGAATGTATTTTCTCCAAACAAATCCATGATGGGAATTCAGTGATCAAGTTCAGAAATCTAGTGGAACTGAAGCTACAAGAACTCCCAAGCCTTGTTGGGTTCGCTATACCGGATCATAACAATGAGCTTCATCTCTTAGAATCCCAGGTTCAAGAACAGAAGCTTGAAGATGTTCAACATCTGCTAGGGTCCAACTCAATATTAGGAGCTGACGCATCCGTTCACATTGGCGGTACACTATTTGAATCCAAATGGATGCCCCAGTTCCCAAAATTGGAGAAAATCTTATTACTTGAGTGCTCTTTGTTAGATACTGTCTTTGACTTGAAACAGTCGGAAATGGAAGGCCAGCCAGGTCCTATGCTATTTTCTCAGCTCAAAGAAATAGAGATCTCTTGGCTTAGCAAGCTAAGAAATATTTGGAGTAATGTTCCAAGTTATATTCAAGGCTTTCAGAACTTGATATCACTCAAAGTTAAGAAATGTGATGCTTTAAGAAGCATCTTCATTCCCACCGTTGCCAGAACACTCACAAAGCTTCAGAAGCTGGTGATACACAGCTGCCAGTTGATGGAGAAAGTTGTTGGGGATGATGATGGAGGAGAACAAGAGGAAGTGGAAACTCTTCTGTTTGCCAAGTTAGATTCTTTGACACTAAAGGATCTCCCAAACCTTGTGAGCATTTGTCCAGATTGTTATGAGCTAGCCTGGCCATGTCTGAGATATTTATGCATTGAAGGATGTCCCCAGCTGAAGACATCTTCATTGCCAATTCATGACCTAGCAAAGGAAGAGAATCTCAGCAACCCCTTTTCAGATTCTACCCTCCAGGATGTTGGTTTCAGCATTCCTAGGTTTCTCCCTTGTTGCCTTGGATGCACCCCATCAAGCATTGAGATTTCCAACTCAATGGCCAAATCAAATTTCCGACCAGGAAAGATCAGCAACCAGGCTAATTTGACGAGAGACCATATATCTTCTCATGTCAAGGAAATATATACTAGAGAAGAAATGAGGTCCTACATGCCAAATCTGGAACAACTTCAAGTCAAAGGCTGGGATTCATTAGATGCTATATTCCAGCTTGAACAAAACCAGCATTCCAAGGCTAGTGCAAACTGCATAGTAAAACTGGTGCCCATGTTGACAAGTTCAGTAGAAATCACCGGCTTCAACAACCTCACGCTGCTAAGTTTAGAAGCTTGTCAGAATTTAAGATATCTGTTCTCTCATTACATAGCAAGGCTTCTTGTGAAATTGCAAGATGTGAAGGTATCAAACTGTAGGATGGTGGAGCAACTGGTCAAAAGCGAAGATGGCTCAGTTGTATCTTCTTCTGCAAACTCTCTTGATGTTTTTGAGAATGCATTACCAAATCATGCAACATCCATCTCCAAAGATTCATTTGTCTTAGAGTTTCCATCCCTGAAGAGAATCACCATTATTAACTGCAGCGTGCTAGAAGTTATCATCAAGAATGGAGAGTGGACAACAGACCTGACTTCATTTGATCAAGTACAGTCTCTTACTTTAAGCCGTCTGCCAAATCTTGTGAGCTTCTGCTGCCAACCTTGTATTCCTGAGCAACCATATTTAAAGAAATACAGAGGCAACGGCCATCATCAACAAGATCAGGTAGAATAG 4272 0.408 MEFLVAIGTGIVSKLGEMLMDPLTSQFKHLIHYDKNINKMKNELNNLEERKRAIEGMVDADRRNGRRIAPNVEHWLYKVDNVVENELHKVYDDEFVNKNKKCLNGLCPNLVFRYSLSKKAGKMAPELVSLKEQKFDFISYPAPLPSLGSTFTEGIKSFASRESIITEVVDKLKGDEFNRISVCGMGGVGKTTLVKELIKILEVDKVFDEISMAIVSQVPDYRKIQGQIGDTLGLKFDKETLQGRAGQLLERLNKINKVLVVLDDVWTELDFELIGLPSNGQCHKGCKILFTSRNEDVCHRMISQRNFTMPVLSKEEAWDLFRDTVGGHVADRAEIHNIAKEVANECRGLPIAIVTIAKALGNREKHAWEDALDQLRKSSLTSFSEMQEYSIYSCIELSYNFLGNEEAKFLLLLCCLFPEDFDIPIEVLLRYGVGLGLFKDLGALCKARNRVHTLVDTLKKRFLLLDSNEEECVKMHDVVRDTVITIGSKEEHGFAVKYDAGQTGSKEFIWHHSAISLVFDGIKMHPKRLQCPNLRLLQLYLKRREPISENFFHNMSKLTVLGISNLCVPSMSSPFRSLNNLCTLRLEDCQVGDISVICKELRKLEVLSFARSNIKELPAEIGKLSLLRLLDLTDCNDLDQMSSGVLASLSNLEELYLRVRNFHWQEKNSILADLKSLSHQLKVLEISITGIHNFPKDFELKSLVKFWIYVRDATTLSHGFGRRGYLHPNILKLNSVYHKDIKENVAIQQLLKKSEILNLVNVKQLENLICELDEEGFPHLKNLSIQFCNELKYLTDETVYASSCVFPLVQSLSLHNLDNLREICHAKTFTSSCQCFGGLSDLKVEFCNKLKYIFSPSQKSSVGMLERLHVTECYGIECIFSKQIHDGNSVIKFRNLVELKLQELPSLVGFAIPDHNNELHLLESQVQEQKLEDVQHLLGSNSILGADASVHIGGTLFESKWMPQFPKLEKILLLECSLLDTVFDLKQSEMEGQPGPMLFSQLKEIEISWLSKLRNIWSNVPSYIQGFQNLISLKVKKCDALRSIFIPTVARTLTKLQKLVIHSCQLMEKVVGDDDGGEQEEVETLLFAKLDSLTLKDLPNLVSICPDCYELAWPCLRYLCIEGCPQLKTSSLPIHDLAKEENLSNPFSDSTLQDVGFSIPRFLPCCLGCTPSSIEISNSMAKSNFRPGKISNQANLTRDHISSHVKEIYTREEMRSYMPNLEQLQVKGWDSLDAIFQLEQNQHSKASANCIVKLVPMLTSSVEITGFNNLTLLSLEACQNLRYLFSHYIARLLVKLQDVKVSNCRMVEQLVKSEDGSVVSSSANSLDVFENALPNHATSISKDSFVLEFPSLKRITIINCSVLEVIIKNGEWTTDLTSFDQVQSLTLSRLPNLVSFCCQPCIPEQPYLKKYRGNGHHQQDQVE 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5293g00006 1423 Gene3D Ribonuclease Inhibitor 951 1144 IPR032675 -
Pral5293g00006 1423 Pfam NB-ARC domain 162 400 IPR002182 GO:0043531
Pral5293g00006 1423 SUPERFAMILY L domain-like 952 1397 - -
Pral5293g00006 1423 SMART AAA_5 176 322 IPR003593 GO:0016887
Pral5293g00006 1423 Gene3D Ribonuclease Inhibitor 512 938 IPR032675 -
Pral5293g00006 1423 Gene3D - 398 485 IPR036388 -
Pral5293g00006 1423 Gene3D - 311 397 IPR042197 -
Pral5293g00006 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 411 IPR027417 -
Pral5293g00006 1423 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 936 1131 - -
Pral5293g00006 1423 Gene3D Ribonuclease Inhibitor 1187 1409 IPR032675 -
Pral5293g00006 1423 Coils Coil 912 932 - -
Pral5293g00006 1423 Coils Coil 30 64 - -
Pral5293g00006 1423 PRINTS Disease resistance protein signature 252 266 - -
Pral5293g00006 1423 PRINTS Disease resistance protein signature 346 360 - -
Pral5293g00006 1423 PRINTS Disease resistance protein signature 622 638 - -
Pral5293g00006 1423 PRINTS Disease resistance protein signature 179 194 - -
Pral5293g00006 1423 FunFam Probable disease resistance protein At1g61300 149 306 - -
Pral5293g00006 1423 SUPERFAMILY L domain-like 474 878 - -
Pral5293g00006 1423 Gene3D - 148 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5293g00006 Pral-Chr5293 73713 79518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5293g00006 180 520 WRKY Transcription Factor Family AT5G45050 26.050 4.98e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5293g00006 - - vra:106757704 1381.7