Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5286g00027 ATGGTGGGCAACAAAAAATTTCTACTTGTCCTTGATGATGTGAGTGACGTTAGCCAACTTGAAAATTTGGCTCCAAAGCAAGGATGGTTCAGCAAGGGAAGCATAATATTAATAACAACTAGGGATAAGCATTTGCTATCTTCACATGGTGTATCTTCTGTGTATGACATCAAATTCTTGAATGATAATGAATCACTCAAACTTTTCCTTCACAAAGCTTTTAAAGGAGAGCAACCTAATGAAGATTATTTGGACCTTGCTAGAACCGTCATTAAATATGCTGGAGGCCTTCCTTTAGCACTCAAAGTGTTAGGTTCATTTCTTTGCAAAAGAACTATAATGGAATGGAAGGATGCACTGGCTAAGTTCAAGAAGGCTCCTCCAAAGGACATTTTGAAGATACTTCAAGTGAGTTTTGATGGGTTGGACATTAAGGAGAAGACTATATTCTTAGATATCGCTTGTTTTTTCAATGGGATGGCCCAAGATCATGTCATACAAATTTTAGAAACTTTGGATGAGGATCTTCATCCAAGAATTGGAATAACTATTCTTATTGAGAAATCATTGGTAATTGATTATGAAGGGTATCTGTGGGTGCATGAAATTCTACAAGATATGGGGAAATTTATTGTCTATCAAAAATCACCTGATGATGTTGGGAAGCGTTCTAGGATATTATCTTTAGAGGATGCTAATCATGTGCTAGAAAGAAATAAGGGGACAGAAGCAATTCGAGGAATATTGTTAAGATTAGAAAAGTCATGTGATGTATTTTGGGATCCTAAAGCCTTCTTAAAGATGAGTAATCTCAAGATACTTATTATTTCAATTTCAAGTTACTCAGATGTTTCACATTGCCAGTTGAATCTTCCTTATGGACTCAAGACACTTTCCAGTGAGTTGAAAATCATAGAATGGGAGAGGTATCCATTACTTTATTTGCCGAGTCAACCTCAATTACATAAACTTGTTGAACTAAAAATGCAGCATAGCAAATTAAAAGAACTTTGGAGAGAAATACAGCCTCTTCAAAGCCTGAAGTCCATTGATCTATCCCATTCAGAATGCCTCATCAAAACACCAAATTTTGATGGAATTCCTCATCTTGAAAAATTGATTCTTGAAGGGTGTTTTAATTTGGTTGAAATTGACCAGTCTCTTGGCCAACACAAGAAACTTGTCATTGTTAACTTGAAAGGTTGCAGAAAAGTTAAAATCCTTCCAAGAAAAGTTGAGATGAATAAATTAGAAGCTGTTGTTCTATCTGGTTGTACAAGAATTAGAAAGCTTCCTCAGTTTGGAAAAGATATGAAATGTTTATCTAAGCTTGATGTACAGGAGACTTCTATAACCAAACTACCTCAATCATTGGGCAATTTGATTGGTCTCACTGAATTGAATTTGGAAAATTGCAAAAAGCTAGTTTGTCTTCCATATAACATTTGTAAATTGAAAGCTTTGAAAATTATCAGAATTCCAGGCTGCTCAAAGCTTTCAAAGTTGCCCGAGAATTTGAATGAAAATGAGGCTTTGGAAGAGCTTGATTTGAGTAAAATTGCTGTGAAAGGGTTATCACTTTATAAATACAATGCTGAAGCACAATCTTTATCATCATGGAGTTGCTTCTCCCTTCTTTGTCGAAGGCCTTTGAGCTCAACAAATTTTATATTGTCACCGCCTTTGTCATTCTTGAGGAAATTAAATTTAGTTAATTGCAATCTCCATGATGGATCACTTCTCGATGACATCAGCAAGTTATCATCACTGGAAGTTTTAGATCTAAGTGAAACAATTTCATTGACTTACCATCTGCCTGATTTCCAATCTTTCCAAGCTTCAAGGTCTTAA 1851 0.3528 MVGNKKFLLVLDDVSDVSQLENLAPKQGWFSKGSIILITTRDKHLLSSHGVSSVYDIKFLNDNESLKLFLHKAFKGEQPNEDYLDLARTVIKYAGGLPLALKVLGSFLCKRTIMEWKDALAKFKKAPPKDILKILQVSFDGLDIKEKTIFLDIACFFNGMAQDHVIQILETLDEDLHPRIGITILIEKSLVIDYEGYLWVHEILQDMGKFIVYQKSPDDVGKRSRILSLEDANHVLERNKGTEAIRGILLRLEKSCDVFWDPKAFLKMSNLKILIISISSYSDVSHCQLNLPYGLKTLSSELKIIEWERYPLLYLPSQPQLHKLVELKMQHSKLKELWREIQPLQSLKSIDLSHSECLIKTPNFDGIPHLEKLILEGCFNLVEIDQSLGQHKKLVIVNLKGCRKVKILPRKVEMNKLEAVVLSGCTRIRKLPQFGKDMKCLSKLDVQETSITKLPQSLGNLIGLTELNLENCKKLVCLPYNICKLKALKIIRIPGCSKLSKLPENLNENEALEELDLSKIAVKGLSLYKYNAEAQSLSSWSCFSLLCRRPLSSTNFILSPPLSFLRKLNLVNCNLHDGSLLDDISKLSSLEVLDLSETISLTYHLPDFQSFQASRS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5286g00027 616 Gene3D - 59 143 IPR042197 -
Pral5286g00027 616 PRINTS Disease resistance protein signature 1 14 - -
Pral5286g00027 616 PRINTS Disease resistance protein signature 585 601 - -
Pral5286g00027 616 PRINTS Disease resistance protein signature 94 108 - -
Pral5286g00027 616 Gene3D Ribonuclease Inhibitor 255 435 IPR032675 -
Pral5286g00027 616 Gene3D Ribonuclease Inhibitor 436 615 IPR032675 -
Pral5286g00027 616 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 434 IPR044974 GO:0006952
Pral5286g00027 616 Pfam NB-ARC domain 4 129 IPR002182 GO:0043531
Pral5286g00027 616 SUPERFAMILY "Winged helix" DNA-binding domain 130 236 IPR036390 -
Pral5286g00027 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 153 IPR027417 -
Pral5286g00027 616 Gene3D - 1 53 IPR027417 -
Pral5286g00027 616 SUPERFAMILY L domain-like 259 611 - -
Pral5286g00027 616 Pfam Leucine Rich Repeat 323 342 IPR011713 -
Pral5286g00027 616 FunFam Disease resistance protein (TIR-NBS-LRR class) 61 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5286g00027 Pral-Chr5286 347274 349334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5286g00027 5 525 WRKY Transcription Factor Family AT4G12020 33.774 4.34e-71 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5286g00027 - - pcin:129318967 698.353